RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 BTF3P20290 206 aaKnown RBP9.64□□□□□ -0.87
PNKP-223ENST00000629179 GAGE1Q13065 139 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 GAGE4Q13068 117 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 GAGE5Q13069 117 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
PNKP-223ENST00000629179 OR10AG1Q8NH19 301 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
PNKP-223ENST00000629179 EVI2AP22794 236 aa9.63□□□□□ -0.87
PNKP-223ENST00000629179 GNG4P50150 75 aa9.63□□□□□ -0.87
PNKP-223ENST00000629179 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
PNKP-223ENST00000629179 TRBV20OR9-2A0A075B6H5 130 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 IGHV3-38A0A0C4DH36 116 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 SNAI2O43623 268 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 LINC00694P0DN24 101 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 SSTP61278 116 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 BLOC1S1P78537 153 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 OR10J3Q5JRS4 329 aa9.62□□□□□ -0.87
PNKP-223ENST00000629179 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
PNKP-223ENST00000629179 OR5AL1P0C617 328 aa9.61□□□□□ -0.87
PNKP-223ENST00000629179 GZMBP10144 247 aa9.61□□□□□ -0.87
PNKP-223ENST00000629179 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
PNKP-223ENST00000629179 LELP1Q5T871 98 aa9.61□□□□□ -0.87
PNKP-223ENST00000629179 DAZAP1Q96EP5 407 aaKnown RBP9.61□□□□□ -0.87
PNKP-223ENST00000629179 MSRB1Q9NZV6 116 aa9.61□□□□□ -0.87
PNKP-223ENST00000629179 C19orf71A6NCJ1 209 aa9.6□□□□□ -0.87
PNKP-223ENST00000629179 K7EP13 123 aa9.6□□□□□ -0.87
PNKP-223ENST00000629179 SPANXN1Q5VSR9 72 aa9.6□□□□□ -0.87
PNKP-223ENST00000629179 SPATA12Q7Z6I5 190 aa9.6□□□□□ -0.87
PNKP-223ENST00000629179 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
PNKP-223ENST00000629179 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
PNKP-223ENST00000629179 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 C16orf90A8MZG2 172 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 LINC01556Q5JQF7 62 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 C10orf126Q8N4M7 172 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
PNKP-223ENST00000629179 P01737 135 aa9.58□□□□□ -0.88
PNKP-223ENST00000629179 KRTAP10-2P60368 255 aa9.58□□□□□ -0.88
PNKP-223ENST00000629179 RPS20P60866 119 aaKnown RBP9.58□□□□□ -0.88
PNKP-223ENST00000629179 TPPP3Q9BW30 176 aa9.58□□□□□ -0.88
PNKP-223ENST00000629179 IGLC6P0CF74 106 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 RAB4BP61018 213 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 ZNF56Q15929 161 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 Q8N3U1 123 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 FER1L6-AS1Q8NA97 138 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 NUDT10Q8NFP7 164 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 OCC1Q8TAD7 63 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 BIN3Q9NQY0 253 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 DNAH11Q96DT5 4516 aa9.57□□□□□ -0.88
PNKP-223ENST00000629179 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
PNKP-223ENST00000629179 F5H697 171 aa9.56□□□□□ -0.88
PNKP-223ENST00000629179 K7EN84 100 aa9.56□□□□□ -0.88
PNKP-223ENST00000629179 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
PNKP-223ENST00000629179 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
PNKP-223ENST00000629179 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 S100A1P23297 94 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 UBE2D3P61077 147 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 UBE2D2P62837 147 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 TOR2AQ5JU69 321 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 NEXN-AS1Q8NBZ9 246 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 KIF25-AS1Q9Y6Z4 181 aa9.55□□□□□ -0.88
PNKP-223ENST00000629179 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
PNKP-223ENST00000629179 A0A087WWC5 75 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.88
PNKP-223ENST00000629179 CEBPGP53567 150 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 ERVFC1-1P60608 527 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 OR10G8Q8NGN5 311 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 AP1S3Q96PC3 154 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
PNKP-223ENST00000629179 Q9HAA7 133 aa9.54□□□□□ -0.88
PNKP-223ENST00000629179 A0A087WTM6 91 aa9.53□□□□□ -0.88
PNKP-223ENST00000629179 ATP6V1G1O75348 118 aa9.53□□□□□ -0.88
PNKP-223ENST00000629179 SMIM17P0DL12 118 aa9.53□□□□□ -0.88
PNKP-223ENST00000629179 CACNG7P62955 275 aa9.53□□□□□ -0.88
PNKP-223ENST00000629179 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
PNKP-223ENST00000629179 F2Z2F3 143 aa9.52□□□□□ -0.89
PNKP-223ENST00000629179 EREGO14944 169 aa9.52□□□□□ -0.89
PNKP-223ENST00000629179 MGPP08493 103 aa9.52□□□□□ -0.89
PNKP-223ENST00000629179 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
PNKP-223ENST00000629179 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
PNKP-223ENST00000629179 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
PNKP-223ENST00000629179 PSCAO43653 123 aa9.51□□□□□ -0.89
PNKP-223ENST00000629179 NTF3P20783 257 aa9.51□□□□□ -0.89
PNKP-223ENST00000629179 NIT1Q86X76 327 aa9.51□□□□□ -0.89
PNKP-223ENST00000629179 HERC2O95714 4834 aa9.51□□□□□ -0.89
PNKP-223ENST00000629179 IFITM2Q01629 132 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms