RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 MED14OSP0DP75 135 aa13.6□□□□□ -0.23
FARP1-242ENST00000627049 RNF185Q96GF1 192 aa13.6□□□□□ -0.23
FARP1-242ENST00000627049 CRYGBP07316 175 aa13.59□□□□□ -0.23
FARP1-242ENST00000627049 HERVK_113P63121 156 aa13.59□□□□□ -0.23
FARP1-242ENST00000627049 ZNRF2Q8NHG8 242 aa13.59□□□□□ -0.23
FARP1-242ENST00000627049 CITED1Q99966 193 aa13.58□□□□□ -0.23
FARP1-242ENST00000627049 BAALC-AS2P0C853 105 aa13.58□□□□□ -0.24
FARP1-242ENST00000627049 LRP4O75096 1905 aa13.58□□□□□ -0.24
FARP1-242ENST00000627049 NEXN-AS1Q8NBZ9 246 aa13.58□□□□□ -0.24
FARP1-242ENST00000627049 H3BUA1 57 aa13.58□□□□□ -0.24
FARP1-242ENST00000627049 JPT2Q9H910 190 aa13.58□□□□□ -0.24
FARP1-242ENST00000627049 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
FARP1-242ENST00000627049 LAMTOR3Q9UHA4 124 aa13.57□□□□□ -0.24
FARP1-242ENST00000627049 TRACP01848 142 aa13.57□□□□□ -0.24
FARP1-242ENST00000627049 SPATA25Q9BR10 227 aa13.57□□□□□ -0.24
FARP1-242ENST00000627049 H3BT86 120 aa13.57□□□□□ -0.24
FARP1-242ENST00000627049 Q9H8V8 135 aa13.57□□□□□ -0.24
FARP1-242ENST00000627049 PTPRSQ13332 1948 aa13.56□□□□□ -0.24
FARP1-242ENST00000627049 GNLYP22749 145 aa13.56□□□□□ -0.24
FARP1-242ENST00000627049 PIP4P1Q86T03 277 aa13.56□□□□□ -0.24
FARP1-242ENST00000627049 CENPFP49454 3210 aa13.55□□□□□ -0.24
FARP1-242ENST00000627049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.55□□□□□ -0.24
FARP1-242ENST00000627049 IGKV2-29A2NJV5 120 aaPredicted RBP13.55□□□□□ -0.24
FARP1-242ENST00000627049 XCL2Q9UBD3 114 aa13.55□□□□□ -0.24
FARP1-242ENST00000627049 TTC28Q96AY4 2481 aa13.55□□□□□ -0.24
FARP1-242ENST00000627049 FAM236AA0A1B0GUQ0 79 aa13.54□□□□□ -0.24
FARP1-242ENST00000627049 FAM236BA0A1B0GV22 79 aa13.54□□□□□ -0.24
FARP1-242ENST00000627049 PFN2P35080 140 aa13.54□□□□□ -0.24
FARP1-242ENST00000627049 DEFB1P60022 68 aa13.54□□□□□ -0.24
FARP1-242ENST00000627049 Q8N1Y9 231 aa13.54□□□□□ -0.24
FARP1-242ENST00000627049 GRNP28799 593 aaKnown RBP13.53□□□□□ -0.24
FARP1-242ENST00000627049 SPANXCQ9NY87 97 aa13.53□□□□□ -0.24
FARP1-242ENST00000627049 NDUFV3P56181 108 aaKnown RBP13.53□□□□□ -0.24
FARP1-242ENST00000627049 C11orf44Q8N8P7 122 aa13.53□□□□□ -0.24
FARP1-242ENST00000627049 SLC25A29Q8N8R3 303 aa13.53□□□□□ -0.24
FARP1-242ENST00000627049 TMEM126AQ9H061 195 aa13.53□□□□□ -0.24
FARP1-242ENST00000627049 MSMBP08118 114 aa13.52□□□□□ -0.24
FARP1-242ENST00000627049 A0A0J9YY99 117 aa13.52□□□□□ -0.25
FARP1-242ENST00000627049 C22orf34Q6ZV56 151 aa13.52□□□□□ -0.25
FARP1-242ENST00000627049 K7ENP7 123 aa13.51□□□□□ -0.25
FARP1-242ENST00000627049 CMC4P56277 68 aaPredicted RBP13.51□□□□□ -0.25
FARP1-242ENST00000627049 CLEC2BQ92478 149 aa13.51□□□□□ -0.25
FARP1-242ENST00000627049 TMEM243Q9BU79 118 aa13.51□□□□□ -0.25
FARP1-242ENST00000627049 A0A0B4J2C4 111 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 INSL3P51460 131 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 RS1O15537 224 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 OPRPNQ99935 248 aaPredicted RBP13.5□□□□□ -0.25
FARP1-242ENST00000627049 C20orf203Q8NBC4 194 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 AJUBAQ96IF1 538 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 HHLA3Q9XRX5 114 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 LGALS9O00182 355 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 UBL5Q9BZL1 73 aa13.5□□□□□ -0.25
FARP1-242ENST00000627049 C5orf56Q8N8D9 126 aa13.49□□□□□ -0.25
FARP1-242ENST00000627049 SMAD5-AS1Q9Y6J3 95 aa13.49□□□□□ -0.25
FARP1-242ENST00000627049 IGHV3-30-3P0DP02 117 aa13.49□□□□□ -0.25
FARP1-242ENST00000627049 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
FARP1-242ENST00000627049 SS18Q15532 418 aa13.48□□□□□ -0.25
FARP1-242ENST00000627049 DAND5Q8N907 189 aa13.48□□□□□ -0.25
FARP1-242ENST00000627049 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
FARP1-242ENST00000627049 TRBV7-3A0A075B6L6 115 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 NRACQ8N912 160 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 COL5A1P20908 1838 aaPredicted RBP13.47□□□□□ -0.25
FARP1-242ENST00000627049 TEX49A0A1B0GTD5 131 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 LINC01619G3V211 115 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 HERV-K104P63124 156 aa13.47□□□□□ -0.25
FARP1-242ENST00000627049 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.25
FARP1-242ENST00000627049 HTN3P15516 51 aa13.46□□□□□ -0.25
FARP1-242ENST00000627049 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.25
FARP1-242ENST00000627049 Q71RC1 249 aaPredicted RBP13.46□□□□□ -0.26
FARP1-242ENST00000627049 RPL35AP18077 110 aaKnown RBP13.45□□□□□ -0.26
FARP1-242ENST00000627049 A0A096LNJ9 63 aa13.45□□□□□ -0.26
FARP1-242ENST00000627049 A0A0J9YXY3 114 aa13.45□□□□□ -0.26
FARP1-242ENST00000627049 NACAE9PAV3 2078 aa13.45□□□□□ -0.26
FARP1-242ENST00000627049 CLUHP3Q96NS8 147 aa13.45□□□□□ -0.26
FARP1-242ENST00000627049 ZFHX2Q9C0A1 2572 aaPredicted RBP13.45□□□□□ -0.26
FARP1-242ENST00000627049 XGP55808 180 aa13.45□□□□□ -0.26
FARP1-242ENST00000627049 GATA3P23771 443 aa13.44□□□□□ -0.26
FARP1-242ENST00000627049 ATOX1O00244 68 aa13.44□□□□□ -0.26
FARP1-242ENST00000627049 ZFP36P26651 326 aaKnown RBP13.44□□□□□ -0.26
FARP1-242ENST00000627049 CNFNQ9BYD5 112 aa13.44□□□□□ -0.26
FARP1-242ENST00000627049 ODF3BA8MYP8 253 aa13.44□□□□□ -0.26
FARP1-242ENST00000627049 LY6LH3BQJ8 138 aa13.44□□□□□ -0.26
FARP1-242ENST00000627049 CEP350Q5VT06 3117 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 IGF1P05019 195 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 TNRC6BQ9UPQ9 1833 aaKnown RBP13.43□□□□□ -0.26
FARP1-242ENST00000627049 IGHV3-33P01772 117 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 BLCAPP62952 87 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 IGF2-ASQ6U949 168 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 CFHR3Q02985 330 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 NSUN5P1Q3KNT7 163 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 U3KQE9 123 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 TECTAO75443 2155 aa13.43□□□□□ -0.26
FARP1-242ENST00000627049 LINC01356Q8N9X3 169 aa13.42□□□□□ -0.26
FARP1-242ENST00000627049 ZFAND3Q9H8U3 227 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms