RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RASL11AQ6T310 242 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 GATD1Q8NB37 220 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 BORCS7Q96B45 105 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 MSRB1Q9NZV6 116 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 PHOX2AO14813 284 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 NXPH4O95158 308 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 HTN1P15515 57 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 AZU1P20160 251 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 DAD1P61803 113 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 CACNG7P62955 275 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 ZNF415Q09FC8 603 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 C11orf72Q8NBR9 251 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 GNB1LQ9BYB4 327 aa8.95□□□□□ -0.98
PNKP-217ENST00000625216 NACAE9PAV3 2078 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 HLA-DQA1P01909 254 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 TRGC2P03986 189 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 NTF3P20783 257 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 RAB4BP61018 213 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 COX19Q49B96 90 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 SPANXN1Q5VSR9 72 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 WDR73Q6P4I2 378 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 RNASE8Q8TDE3 154 aaKnown RBP8.94□□□□□ -0.98
PNKP-217ENST00000625216 MRPL18Q9H0U6 180 aaKnown RBP8.94□□□□□ -0.98
PNKP-217ENST00000625216 TRAPPC1Q9Y5R8 145 aa8.94□□□□□ -0.98
PNKP-217ENST00000625216 A0A1B0GW15 77 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 M0R381 172 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 MT-ND6P03923 174 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 FABP9Q0Z7S8 132 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 TWIST1Q15672 202 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 ZNF493Q6ZR52 646 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 POM121L12Q8N7R1 296 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
PNKP-217ENST00000625216 PHLDA3Q9Y5J5 127 aa8.93□□□□□ -0.98
PNKP-217ENST00000625216 PLAC8L1A1L4L8 177 aa8.92□□□□□ -0.98
PNKP-217ENST00000625216 SLAQ13239 276 aa8.92□□□□□ -0.98
PNKP-217ENST00000625216 DMRTA1Q5VZB9 504 aa8.92□□□□□ -0.98
PNKP-217ENST00000625216 ZFP82Q8N141 532 aa8.92□□□□□ -0.98
PNKP-217ENST00000625216 TMEM263Q8WUH6 116 aaKnown RBP8.92□□□□□ -0.98
PNKP-217ENST00000625216 FRZBQ92765 325 aa8.92□□□□□ -0.98
PNKP-217ENST00000625216 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
PNKP-217ENST00000625216 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 C1orf196B1AJZ1 125 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 S100A8P05109 93 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 HTN3P15516 51 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 KIAA1644Q3SXP7 199 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 AMN1Q8IY45 258 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 JPT2Q9H910 190 aa8.91□□□□□ -0.98
PNKP-217ENST00000625216 DEFB130BP0DP73 79 aa8.9□□□□□ -0.98
PNKP-217ENST00000625216 DEFB130AP0DP74 79 aa8.9□□□□□ -0.98
PNKP-217ENST00000625216 EVI2AP22794 236 aa8.9□□□□□ -0.98
PNKP-217ENST00000625216 C15orf53Q8NAA6 179 aa8.9□□□□□ -0.98
PNKP-217ENST00000625216 RNF185Q96GF1 192 aa8.9□□□□□ -0.98
PNKP-217ENST00000625216 MRPL16Q9NX20 251 aaKnown RBP8.9□□□□□ -0.98
PNKP-217ENST00000625216 DNAH2Q9P225 4427 aa8.9□□□□□ -0.99
PNKP-217ENST00000625216 M0R2P5 195 aa8.89□□□□□ -0.99
PNKP-217ENST00000625216 APCSP02743 223 aa8.89□□□□□ -0.99
PNKP-217ENST00000625216 TRGC1P0CF51 173 aa8.89□□□□□ -0.99
PNKP-217ENST00000625216 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
PNKP-217ENST00000625216 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
PNKP-217ENST00000625216 SPXQ9BT56 116 aa8.89□□□□□ -0.99
PNKP-217ENST00000625216 ATP5G1P05496 136 aa8.88□□□□□ -0.99
PNKP-217ENST00000625216 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
PNKP-217ENST00000625216 PTH2Q96A98 100 aa8.88□□□□□ -0.99
PNKP-217ENST00000625216 KIF25-AS1Q9Y6Z4 181 aa8.88□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BKO60814 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BJP06899 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BOP23527 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 RAB5BP61020 215 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 LGALS9BQ3B8N2 356 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 ZNF876PQ49A33 203 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 MRPL51Q4U2R6 128 aaKnown RBP8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
PNKP-217ENST00000625216 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 C14orf178Q8N769 122 aaPredicted RBP8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 SAMD10Q9BYL1 202 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 DPH3P1Q9H4G8 78 aa8.87□□□□□ -0.99
PNKP-217ENST00000625216 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
PNKP-217ENST00000625216 DNAH17Q9UFH2 4485 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 F5H768 121 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 SMKR1H3BMG3 65 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 NCR2O95944 276 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 RAB4AP20338 218 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 SRIP30626 198 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 LINC00315P59091 139 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 DAZ2Q13117 558 aaKnown RBP8.86□□□□□ -0.99
PNKP-217ENST00000625216 Q6ZTI0 123 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
PNKP-217ENST00000625216 A0A087WWL8 130 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 TRGV1A0A0A0MS02 117 aa8.85□□□□□ -0.99
PNKP-217ENST00000625216 D6R8Y8 96 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms