RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 TRAV12-2A0A075B6T6 113 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 TRAV25A0A0B4J276 109 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 VSIG2Q96IQ7 327 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 MED12LQ86YW9 2145 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 LRRC75A-AS1Q8N1F1 130 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 U3KQK5 164 aa6.92□□□□□ -1.3
VCL-206ENST00000623461 IGLV11-55A0A075B6I3 123 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 NXPH4O95158 308 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 IGLC6P0CF74 106 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 Q6Q795 121 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 COL4A3Q01955 1670 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 MIAQ16674 131 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 CLUHP3Q96NS8 147 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 CRYGCP07315 174 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 TMEM61Q8N0U2 210 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
VCL-206ENST00000623461 NDUFA7O95182 113 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.9□□□□□ -1.3
VCL-206ENST00000623461 IGKV2-29A2NJV5 120 aaPredicted RBP6.9□□□□□ -1.3
VCL-206ENST00000623461 CGB3P0DN86 165 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 MDFICQ9P1T7 246 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 CGB7P0DN87 165 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 BRD3OSQ6XYD6 125 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 ATP5EP2Q5VTU8 51 aa6.9□□□□□ -1.3
VCL-206ENST00000623461 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 PDE6GP18545 87 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 TMEM256-PLSCR3K7ERE1 68 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 IGLV2-23P01705 113 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 RNF152Q8N8N0 203 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 FAM236CP0DP71 79 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 UFSP1Q6NVU6 142 aa6.9□□□□□ -1.31
VCL-206ENST00000623461 OPRPNQ99935 248 aaPredicted RBP6.9□□□□□ -1.31
VCL-206ENST00000623461 BUB3O43684 328 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 C16orf54Q6UWD8 224 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 COX7A2LO14548 114 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 RPL39P62891 51 aaKnown RBP6.89□□□□□ -1.31
VCL-206ENST00000623461 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
VCL-206ENST00000623461 LINC00322Q6ZN03 302 aaPredicted RBP6.89□□□□□ -1.31
VCL-206ENST00000623461 HCFC1P51610 2035 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 SPG11Q96JI7 2443 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 C11orf44Q8N8P7 122 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 XCL2Q9UBD3 114 aa6.89□□□□□ -1.31
VCL-206ENST00000623461 PLXNB1O43157 2135 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 EXPH5Q8NEV8 1989 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 COX7B2Q8TF08 81 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 IGKV1D-37A0A075B6S9 117 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 CTSGP08311 255 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 DAZ2Q13117 558 aaKnown RBP6.88□□□□□ -1.31
VCL-206ENST00000623461 DAZ4Q86SG3 579 aaKnown RBP6.88□□□□□ -1.31
VCL-206ENST00000623461 Q8N976 141 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 DAZ3Q9NR90 486 aaKnown RBP6.88□□□□□ -1.31
VCL-206ENST00000623461 TEX22C9J3V5 150 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 LY6DQ14210 128 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 TP73-AS1Q9UF72 201 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 V9GYY9 64 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 ATP5EP56381 51 aaPredicted RBP6.88□□□□□ -1.31
VCL-206ENST00000623461 NOTCH4Q99466 2003 aa6.88□□□□□ -1.31
VCL-206ENST00000623461 NDUFC2-KCTD14E9PQ53 114 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 TRAV4A0A0B4J268 109 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 IGHV3-30-3P0DP02 117 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 ARHGAP21Q5T5U3 1957 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 DAD1P61803 113 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
VCL-206ENST00000623461 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
VCL-206ENST00000623461 LY6G6EA0A0G2JKS1 128 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 A0A0J9YY99 117 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 CRIP3Q6Q6R5 217 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 NFE4Q86UQ8 179 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 MAPKAPK5-AS1Q8N8E1 139 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 U3KQA8 63 aa6.87□□□□□ -1.31
VCL-206ENST00000623461 LECT2O14960 151 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 CCDC179H3BU77 68 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 XGP55808 180 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 C20orf203Q8NBC4 194 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 IGKV2D-26A0A0A0MRZ7 120 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 MP68P56378 58 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 Q6ZPA2 131 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 DEFB130BP0DP73 79 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 DEFB130AP0DP74 79 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 C4orf48Q5BLP8 95 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 BPESC1Q9GZL8 116 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 CTSZQ9UBR2 303 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 PRAC2D3DTV9 90 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 HIST2H2BCQ6DN03 193 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 RITA1Q96K30 269 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 MRPL36Q9P0J6 103 aaKnown RBP6.86□□□□□ -1.31
VCL-206ENST00000623461 U3KQE9 123 aa6.86□□□□□ -1.31
VCL-206ENST00000623461 MUC4Q99102 2169 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 FAM208BQ5VWN6 2430 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
VCL-206ENST00000623461 COX7CP15954 63 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms