RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 NACAE9PAV3 2078 aa14.01□□□□□ -0.17
PDLIM2-221ENST00000622702 TRAV9-1A0A075B6T8 112 aa14□□□□□ -0.17
PDLIM2-221ENST00000622702 TRGC1P0CF51 173 aa14□□□□□ -0.17
PDLIM2-221ENST00000622702 S100PP25815 95 aa14□□□□□ -0.17
PDLIM2-221ENST00000622702 ATP5L2Q7Z4Y8 100 aa14□□□□□ -0.17
PDLIM2-221ENST00000622702 ZNF479Q96JC4 524 aa14□□□□□ -0.17
PDLIM2-221ENST00000622702 DYNC2H1Q8NCM8 4307 aaKnown RBP14□□□□□ -0.17
PDLIM2-221ENST00000622702 A0A1B0GW15 77 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 CRYGDP07320 174 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 UFSP1Q6NVU6 142 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 ZFP2Q6ZN57 461 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 BTF3L4Q96K17 158 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 SAMD10Q9BYL1 202 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 RHODO00212 210 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 IGHV3-53P01767 116 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 KIF25-AS1Q9Y6Z4 181 aa13.99□□□□□ -0.17
PDLIM2-221ENST00000622702 KMT2CQ8NEZ4 4911 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-221ENST00000622702 A0A1B0GXF2 115 aa13.98□□□□□ -0.17
PDLIM2-221ENST00000622702 EVI2AP22794 236 aa13.98□□□□□ -0.17
PDLIM2-221ENST00000622702 MRPL54Q6P161 138 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-221ENST00000622702 C14orf178Q8N769 122 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-221ENST00000622702 URGCP-MRPS24S4R325 110 aa13.98□□□□□ -0.17
PDLIM2-221ENST00000622702 A0A087WWL8 130 aa13.97□□□□□ -0.17
PDLIM2-221ENST00000622702 TRAV10A0A0B4J240 114 aa13.97□□□□□ -0.17
PDLIM2-221ENST00000622702 PHLDA1Q8WV24 401 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-221ENST00000622702 PLECQ15149 4684 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 NUPR2A6NF83 97 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 S100A8P05109 93 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 SMIM17P0DL12 118 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 HOXA5P20719 270 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 HBBP68871 147 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 FHL2Q14192 279 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 FAM74A4Q5TZK3 123 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 CEMP1Q6PRD7 247 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 SMIM15Q7Z3B0 74 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 TMEM191AQ9H0A3 160 aa13.96□□□□□ -0.17
PDLIM2-221ENST00000622702 DEFB131BA0A096LNP1 70 aa13.95□□□□□ -0.18
PDLIM2-221ENST00000622702 LINC00315P59091 139 aa13.95□□□□□ -0.18
PDLIM2-221ENST00000622702 DPH3P1Q9H4G8 78 aa13.95□□□□□ -0.18
PDLIM2-221ENST00000622702 SMCO4Q9NRQ5 59 aa13.95□□□□□ -0.18
PDLIM2-221ENST00000622702 IGHV3-73A0A0B4J1V6 119 aa13.94□□□□□ -0.18
PDLIM2-221ENST00000622702 TRGV4A0A0C4DH28 118 aa13.94□□□□□ -0.18
PDLIM2-221ENST00000622702 HTN3P15516 51 aa13.94□□□□□ -0.18
PDLIM2-221ENST00000622702 CAMPP49913 170 aa13.94□□□□□ -0.18
PDLIM2-221ENST00000622702 RASL11AQ6T310 242 aa13.94□□□□□ -0.18
PDLIM2-221ENST00000622702 GATD1Q8NB37 220 aa13.94□□□□□ -0.18
PDLIM2-221ENST00000622702 F5H768 121 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 GATA1P15976 413 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 SLAQ13239 276 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 ELOBQ15370 118 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 TMEM88Q6PEY1 159 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 CBLN2Q8IUK8 224 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 YPEL4Q96NS1 127 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 PRO0255Q9UI72 69 aa13.93□□□□□ -0.18
PDLIM2-221ENST00000622702 TRBV24-1A0A075B6N3 115 aa13.92□□□□□ -0.18
PDLIM2-221ENST00000622702 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
PDLIM2-221ENST00000622702 KLK5Q9Y337 293 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-221ENST00000622702 TRBV6-4A0A1B0GX49 114 aa13.91□□□□□ -0.18
PDLIM2-221ENST00000622702 RAB4BP61018 213 aa13.91□□□□□ -0.18
PDLIM2-221ENST00000622702 Q6ZSN1 163 aa13.91□□□□□ -0.18
PDLIM2-221ENST00000622702 MGPP08493 103 aa13.9□□□□□ -0.18
PDLIM2-221ENST00000622702 CRYBA4P53673 196 aa13.9□□□□□ -0.18
PDLIM2-221ENST00000622702 ZNF56Q15929 161 aa13.9□□□□□ -0.18
PDLIM2-221ENST00000622702 FAM210BQ96KR6 192 aa13.9□□□□□ -0.18
PDLIM2-221ENST00000622702 LYSTQ99698 3801 aa13.89□□□□□ -0.19
PDLIM2-221ENST00000622702 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
PDLIM2-221ENST00000622702 FAM104BQ5XKR9 115 aa13.89□□□□□ -0.19
PDLIM2-221ENST00000622702 SLC25A29Q8N8R3 303 aa13.89□□□□□ -0.19
PDLIM2-221ENST00000622702 SACSQ9NZJ4 4579 aa13.89□□□□□ -0.19
PDLIM2-221ENST00000622702 TRAV26-1A0A087WT03 109 aa13.88□□□□□ -0.19
PDLIM2-221ENST00000622702 F5H697 171 aa13.88□□□□□ -0.19
PDLIM2-221ENST00000622702 AMN1Q8IY45 258 aa13.88□□□□□ -0.19
PDLIM2-221ENST00000622702 FRZBQ92765 325 aa13.88□□□□□ -0.19
PDLIM2-221ENST00000622702 RNF185Q96GF1 192 aa13.88□□□□□ -0.19
PDLIM2-221ENST00000622702 VSIG2Q96IQ7 327 aa13.88□□□□□ -0.19
PDLIM2-221ENST00000622702 H3BNG1 76 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 PAX4O43316 350 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 RAB4AP20338 218 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 RHOHQ15669 191 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 COX19Q49B96 90 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 SUMO4Q6EEV6 95 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 K7EQD1 137 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 SCO1O75880 301 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 TMEM136Q6ZRR5 245 aa13.87□□□□□ -0.19
PDLIM2-221ENST00000622702 M0QY20 66 aa13.86□□□□□ -0.19
PDLIM2-221ENST00000622702 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
PDLIM2-221ENST00000622702 GNB1LQ9BYB4 327 aa13.86□□□□□ -0.19
PDLIM2-221ENST00000622702 DNAH1Q9P2D7 4330 aa13.85□□□□□ -0.19
PDLIM2-221ENST00000622702 A0A0J9YY99 117 aa13.85□□□□□ -0.19
PDLIM2-221ENST00000622702 TRBV10-1A0A0K0K1A3 114 aa13.85□□□□□ -0.19
PDLIM2-221ENST00000622702 IGLL5B9A064 214 aa13.85□□□□□ -0.19
PDLIM2-221ENST00000622702 H7C1H1 209 aa13.85□□□□□ -0.19
PDLIM2-221ENST00000622702 MRAP2Q96G30 205 aa13.85□□□□□ -0.19
PDLIM2-221ENST00000622702 HLA-DQA1P01909 254 aa13.84□□□□□ -0.19
PDLIM2-221ENST00000622702 ALMS1Q8TCU4 4167 aa13.83□□□□□ -0.2
PDLIM2-221ENST00000622702 TRAV26-2A0A0B4J265 109 aa13.83□□□□□ -0.2
PDLIM2-221ENST00000622702 MT-ND6P03923 174 aa13.83□□□□□ -0.2
PDLIM2-221ENST00000622702 MRPL51Q4U2R6 128 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-221ENST00000622702 LCE6AA0A183 80 aa13.82□□□□□ -0.2
PDLIM2-221ENST00000622702 P0DMU3 169 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms