RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TACC2O95359 2948 aa7.13□□□□□ -1.27
IGHV3-54-201ENST00000622166 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 A0A087WWL8 130 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 F5H697 171 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 Q6YL49 198 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 TRPT1Q86TN4 253 aaKnown RBP7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 NFE4Q86UQ8 179 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 WFDC12Q8WWY7 111 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 UBE2E2Q96LR5 201 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 ZNF702PQ9H963 129 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 SPANXB1Q9NS25 103 aaPredicted RBP7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 MDFICQ9P1T7 246 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 VPREB3Q9UKI3 123 aa7.12□□□□□ -1.27
IGHV3-54-201ENST00000622166 TRAV2A0A0B4J234 112 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 F8W1H4 67 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 HOXA3O43365 443 aaPredicted RBP7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 UBE2D1P51668 147 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 ZNF876PQ49A33 203 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 Q8N1Y9 231 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 PLEKHB2Q96CS7 222 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 AGRNO00468 2067 aa7.11□□□□□ -1.27
IGHV3-54-201ENST00000622166 TRAV12-2A0A075B6T6 113 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 A6NJY4 79 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 HOXD3P31249 432 aaPredicted RBP7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 SYNJ2BPP57105 145 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 SCGB2A2Q13296 93 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 COTL1Q14019 142 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 CD300EQ496F6 205 aaPredicted RBP7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 PTH2Q96A98 100 aa7.1□□□□□ -1.27
IGHV3-54-201ENST00000622166 LAMA5O15230 3695 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 A0A0J9YY99 117 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 TGFAP01135 160 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 P0DMU3 169 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 FAM231AP0DMU4 169 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 FAM231CP0DMU5 169 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 ZNF56Q15929 161 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 SPINK13Q1W4C9 94 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 PIK3CD-AS1Q5SR53 167 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 Q8N2B8 174 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 C20orf203Q8NBC4 194 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 NRGNQ92686 78 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 PRO0461Q9UI25 63 aa7.09□□□□□ -1.27
IGHV3-54-201ENST00000622166 I3L3M4 83 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 LEPROTO15243 131 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 IGKV3-20P01619 116 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 IGHV4-31P0DP07 118 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 TCTEX1D4Q5JR98 221 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 Q5PR19 223 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 FAM74A4Q5TZK3 123 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 SCGB1D4Q6XE38 83 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 AMELXQ99217 191 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 SPAG8Q99932 426 aaPredicted RBP7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 LINC00467Q9BRT7 94 aa7.08□□□□□ -1.28
IGHV3-54-201ENST00000622166 AKAP6Q13023 2319 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 TEX48A0A1B0GUV7 120 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 TMEM223A0PJW6 202 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 CRYBA4P53673 196 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 RPL24P83731 157 aaKnown RBP7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 WFDC2Q14508 124 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.28
IGHV3-54-201ENST00000622166 DCHS1Q96JQ0 3298 aa7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 J3QQQ9 107 aa7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 RBMY1FQ15415 496 aaKnown RBP7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 GAGE13Q4V321 117 aa7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 BEX4Q9NWD9 120 aaPredicted RBP7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 PGPEP1Q9NXJ5 209 aa7.06□□□□□ -1.28
IGHV3-54-201ENST00000622166 IGLV4-3A0A075B6K6 122 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 KNCNA6PVL3 124 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 H3BMG7 143 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 H3BMM0 161 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 TSPAN13O95857 204 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 ZNF22P17026 224 aaPredicted RBP7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 LGALS3P17931 250 aaKnown RBP7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 EMP1P54849 157 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 UBE2D3P61077 147 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 UBE2D2P62837 147 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 LYRM7Q5U5X0 104 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 LRRC75A-AS1Q8N1F1 130 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 DLX4Q92988 240 aaPredicted RBP7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 DUX5Q96PT3 197 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 CR1P17927 2039 aa7.05□□□□□ -1.28
IGHV3-54-201ENST00000622166 RBMY1BA6NDE4 496 aaKnown RBP7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 RBMY1EA6NEQ0 496 aaKnown RBP7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 A8MWV9 139 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 J3QR89 54 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms