RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 RS1O15537 224 aa5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 TRIAP1O43715 76 aa5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 RPL27AP46776 148 aaKnown RBP5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 PSMG3-AS1Q96PY0 264 aa5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 PRORYQ9H606 182 aa5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 ZNF318Q5VUA4 2279 aa5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 SPTBN2O15020 2390 aa5.71□□□□□ -1.5
TRIM49B-202ENST00000622138 TRAV13-1A0A0B4J241 112 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 NDUFC2-KCTD14E9PQ53 114 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 COX6CP09669 75 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 ZNF22P17026 224 aaPredicted RBP5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 SEC61GP60059 68 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 KLHL30-AS1Q8NEE0 82 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 LINC00477Q96M19 166 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 MSRB1Q9NZV6 116 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 RIF1Q5UIP0 2472 aaKnown RBP5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 E7EQL1 145 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 LYNX1G3V0Z9 82 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 LST1O00453 97 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 LYNX1P0DP58 116 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 RNASE6Q93091 150 aaKnown RBP5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 PEMTQ9UBM1 199 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 ICOSQ9Y6W8 199 aa5.7□□□□□ -1.5
TRIM49B-202ENST00000622138 TPRP12270 2363 aaKnown RBP5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 IGHV1-69DA0A0B4J2H0 117 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 TMEM223A0PJW6 202 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 COX7A1P24310 79 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 FAM19A4Q96LR4 140 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 AMELXQ99217 191 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 UPK3BQ9BT76 320 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 DYNLRB1Q9NP97 96 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 POLEQ07864 2286 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 LRBAP50851 2863 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 IGLV4-69A0A075B6H9 119 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 IGHV1-3A0A0C4DH29 117 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 LY6LH3BQJ8 138 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 H7C2G1 150 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 I3L2K1 104 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 M0R3E3 92 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 IGKV1-17P01599 117 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 IGLV1-47P01700 117 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 SMCR5Q8TEV8 140 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 DSCR8Q96T75 97 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 KAAG1Q9UBP8 84 aa5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 ZFHX2Q9C0A1 2572 aaPredicted RBP5.69□□□□□ -1.5
TRIM49B-202ENST00000622138 A0A0J9YX75 114 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 J3QQQ9 107 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 LGALS3P17931 250 aaKnown RBP5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 PFN2P35080 140 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 TSPEAR-AS2P59090 65 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 C2orf66Q6UXQ4 117 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 ZNF575Q86XF7 245 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 Q8NA96 180 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 CSMD1Q96PZ7 3565 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 S4R3C0 116 aa5.68□□□□□ -1.5
TRIM49B-202ENST00000622138 IGHV4-4A0A075B6R2 117 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 ZNF80P51504 273 aaPredicted RBP5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 ZNF415Q09FC8 603 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 C9orf85Q96MD7 179 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 V9GYY9 64 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 BUB1B-PAK6H3BSN5 160 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 K7EIM0 57 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 TRGV3P03979 118 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 PSMB8P28062 276 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 TMEM86BQ8N661 226 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 TLN1Q9Y490 2541 aaKnown RBP5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 ARHGAP32A7KAX9 2087 aa5.67□□□□□ -1.5
TRIM49B-202ENST00000622138 TRBV7-1A0A0A6YYK4 115 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 TRAV41A0A0B4J266 112 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 LEPROTO15243 131 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 SUMO2P61956 95 aaKnown RBP5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 MUSTN1Q8IVN3 82 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 DAND5Q8N907 189 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 DCANP1Q8TF63 244 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 KLK15Q9H2R5 256 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 BEX4Q9NWD9 120 aaPredicted RBP5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 CEP295Q9C0D2 2601 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 IGKV2-40A0A087WW87 121 aaPredicted RBP5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 EPM2AB3EWF7 344 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 M0R381 172 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 NDUFC2O95298 119 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 IGKV2D-40P01614 121 aaPredicted RBP5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 GFRALQ6UXV0 394 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 DPH3P1Q9H4G8 78 aa5.66□□□□□ -1.5
TRIM49B-202ENST00000622138 HRNRQ86YZ3 2850 aaPredicted RBP5.65□□□□□ -1.5
TRIM49B-202ENST00000622138 PRIMA1Q86XR5 153 aa5.65□□□□□ -1.5
TRIM49B-202ENST00000622138 RNF152Q8N8N0 203 aa5.65□□□□□ -1.5
TRIM49B-202ENST00000622138 TMEM141Q96I45 108 aa5.65□□□□□ -1.5
TRIM49B-202ENST00000622138 RELNP78509 3460 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 TRAV26-2A0A0B4J265 109 aa5.65□□□□□ -1.51
TRIM49B-202ENST00000622138 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms