RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 EGFEM1PQ0D2K5 195 aa13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 ZNF705AQ6ZN79 300 aaPredicted RBP13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 HSPB8Q9UJY1 196 aa13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 LEPROTL1O95214 131 aa13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 LINC01587Q99440 93 aa13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 CNFNQ9BYD5 112 aa13.54□□□□□ -0.24
SEMA6C-210ENST00000621728 FAM104BQ5XKR9 115 aa13.53□□□□□ -0.24
SEMA6C-210ENST00000621728 SNHG12Q9BXW3 62 aa13.53□□□□□ -0.24
SEMA6C-210ENST00000621728 MUC4Q99102 2169 aa13.53□□□□□ -0.24
SEMA6C-210ENST00000621728 TRAV9-2A0A087WT02 112 aa13.52□□□□□ -0.24
SEMA6C-210ENST00000621728 IGHV3-16A0A0C4DH30 117 aa13.52□□□□□ -0.24
SEMA6C-210ENST00000621728 CBY3A6NI87 242 aa13.52□□□□□ -0.24
SEMA6C-210ENST00000621728 SNAI2O43623 268 aa13.52□□□□□ -0.25
SEMA6C-210ENST00000621728 COTL1Q14019 142 aa13.52□□□□□ -0.25
SEMA6C-210ENST00000621728 SAMD5Q5TGI4 173 aa13.52□□□□□ -0.25
SEMA6C-210ENST00000621728 TMEM208Q9BTX3 173 aa13.52□□□□□ -0.25
SEMA6C-210ENST00000621728 NOTCH1P46531 2555 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 TWIST1Q15672 202 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 MORN3Q6PF18 240 aaPredicted RBP13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 PET117Q6UWS5 81 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 CSNK1G2-AS1Q8NCQ2 148 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 EREGO14944 169 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 IGLC3P0DOY3 106 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 IGHV4-30-4P0DP06 118 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 AZU1P20160 251 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 CSTL1Q9H114 145 aa13.51□□□□□ -0.25
SEMA6C-210ENST00000621728 SYS1-DBNDD2H3BUS1 97 aa13.5□□□□□ -0.25
SEMA6C-210ENST00000621728 FA2HQ7L5A8 372 aa13.5□□□□□ -0.25
SEMA6C-210ENST00000621728 SCRT2Q9NQ03 307 aa13.5□□□□□ -0.25
SEMA6C-210ENST00000621728 NBEAL2Q6ZNJ1 2754 aa13.5□□□□□ -0.25
SEMA6C-210ENST00000621728 M0R381 172 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 PPBPP02775 128 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 TMEM191AQ9H0A3 160 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 LAMTOR2Q9Y2Q5 125 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 NBEAL1Q6ZS30 2694 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 C21orf62-AS1Q17RA5 79 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 SPANXN1Q5VSR9 72 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 PRSS3P2Q8NHM4 247 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 PHLDA3Q9Y5J5 127 aa13.49□□□□□ -0.25
SEMA6C-210ENST00000621728 RIPPLY3P57055 190 aa13.48□□□□□ -0.25
SEMA6C-210ENST00000621728 GAGE1Q13065 139 aa13.48□□□□□ -0.25
SEMA6C-210ENST00000621728 SPATA12Q7Z6I5 190 aa13.48□□□□□ -0.25
SEMA6C-210ENST00000621728 C9orf85Q96MD7 179 aa13.48□□□□□ -0.25
SEMA6C-210ENST00000621728 TRGV11A0A075B6L2 103 aa13.47□□□□□ -0.25
SEMA6C-210ENST00000621728 PRB2P02812 416 aaPredicted RBP13.47□□□□□ -0.25
SEMA6C-210ENST00000621728 PRELID3AQ96N28 172 aa13.47□□□□□ -0.25
SEMA6C-210ENST00000621728 C1QTNF4Q9BXJ3 329 aa13.47□□□□□ -0.25
SEMA6C-210ENST00000621728 ST20Q9HBF5 79 aa13.47□□□□□ -0.25
SEMA6C-210ENST00000621728 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
SEMA6C-210ENST00000621728 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.25
SEMA6C-210ENST00000621728 LINC00467Q9BRT7 94 aa13.46□□□□□ -0.25
SEMA6C-210ENST00000621728 MRPS16Q9Y3D3 137 aaKnown RBP13.46□□□□□ -0.25
SEMA6C-210ENST00000621728 GOLT1BQ9Y3E0 138 aa13.46□□□□□ -0.25
SEMA6C-210ENST00000621728 MGAM2Q2M2H8 2515 aa13.46□□□□□ -0.26
SEMA6C-210ENST00000621728 MRPL51Q4U2R6 128 aaKnown RBP13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 IGHV4-4A0A075B6R2 117 aa13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 D6R8Y8 96 aa13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 EVI2AP22794 236 aa13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 CACNG7P62955 275 aa13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 AMN1Q8IY45 258 aa13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 JPT2Q9H910 190 aa13.45□□□□□ -0.26
SEMA6C-210ENST00000621728 HNRNPA3P51991 378 aaKnown RBP13.44□□□□□ -0.26
SEMA6C-210ENST00000621728 DEFB135Q30KP9 77 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 Q6ZN92 141 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 HSBP1L1C9JCN9 74 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 NXPH4O95158 308 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 CKS2P33552 79 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 LINC01545Q5VT33 79 aa13.43□□□□□ -0.26
SEMA6C-210ENST00000621728 APOC4P55056 127 aa13.42□□□□□ -0.26
SEMA6C-210ENST00000621728 RNASE8Q8TDE3 154 aaKnown RBP13.42□□□□□ -0.26
SEMA6C-210ENST00000621728 DNHD1Q96M86 4753 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 LINC01546A6NGU7 62 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 SVIPQ8NHG7 77 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 KIR2DL5BQ8NHK3 375 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 COL5A1-AS1Q5SY13 56 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 SMIM15Q7Z3B0 74 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 C14orf178Q8N769 122 aaPredicted RBP13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 RNF185Q96GF1 192 aa13.41□□□□□ -0.26
SEMA6C-210ENST00000621728 IFI27P40305 119 aaPredicted RBP13.4□□□□□ -0.26
SEMA6C-210ENST00000621728 ZNF876PQ49A33 203 aa13.4□□□□□ -0.26
SEMA6C-210ENST00000621728 ATOH7Q8N100 152 aa13.4□□□□□ -0.26
SEMA6C-210ENST00000621728 MRPL16Q9NX20 251 aaKnown RBP13.4□□□□□ -0.26
SEMA6C-210ENST00000621728 SMKR1H3BMG3 65 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 GAS8-AS1O95177 125 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 LINC00173Q6ZV60 143 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 MAP1LC3AQ9H492 121 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 X6R8D5 127 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 PLAC8L1A1L4L8 177 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 HBDP02042 147 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 IL17DQ8TAD2 202 aa13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 TMEM263Q8WUH6 116 aaKnown RBP13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 NXT2Q9NPJ8 142 aaKnown RBP13.39□□□□□ -0.27
SEMA6C-210ENST00000621728 A0A087WWL8 130 aa13.38□□□□□ -0.27
SEMA6C-210ENST00000621728 NCR2O95944 276 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms