RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ERVFC1-1P60608 527 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 ESRGQ1W209 222 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 RNF212Q495C1 297 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 SPANXN1Q5VSR9 72 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 LYZL1Q6UWQ5 148 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 TPPP3Q9BW30 176 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 Q9UF83 564 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 GATCO43716 136 aaKnown RBP9.89□□□□□ -0.83
CBWD3-217ENST00000621474 GYPEP15421 78 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 SSTP61278 116 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 CT83Q5H943 113 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 OSTCQ9NRP0 149 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 ICOSQ9Y6W8 199 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 KIF25-AS1Q9Y6Z4 181 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 V9GYV3 84 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 A0A1W2PPQ1 181 aa9.88□□□□□ -0.83
CBWD3-217ENST00000621474 F2Z2F3 143 aa9.87□□□□□ -0.83
CBWD3-217ENST00000621474 RHODO00212 210 aa9.87□□□□□ -0.83
CBWD3-217ENST00000621474 LINC00315P59091 139 aa9.87□□□□□ -0.83
CBWD3-217ENST00000621474 ADIRFQ15847 76 aa9.87□□□□□ -0.83
CBWD3-217ENST00000621474 MRPL23Q16540 153 aaKnown RBP9.87□□□□□ -0.83
CBWD3-217ENST00000621474 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
CBWD3-217ENST00000621474 DNAH2Q9P225 4427 aa9.86□□□□□ -0.83
CBWD3-217ENST00000621474 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
CBWD3-217ENST00000621474 FOXA3P55318 350 aaPredicted RBP9.86□□□□□ -0.83
CBWD3-217ENST00000621474 RHOHQ15669 191 aa9.86□□□□□ -0.83
CBWD3-217ENST00000621474 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
CBWD3-217ENST00000621474 ZNRF2Q8NHG8 242 aa9.86□□□□□ -0.83
CBWD3-217ENST00000621474 ADCYAP1P18509 176 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 NTF3P20783 257 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 CCL18P55774 89 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 CACNG7P62955 275 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 TSKUQ8WUA8 353 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 A8MWL6 223 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 SRIP30626 198 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 LYPD5Q6UWN5 251 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 AP1S3Q96PC3 154 aa9.85□□□□□ -0.83
CBWD3-217ENST00000621474 EVI2AP22794 236 aa9.84□□□□□ -0.83
CBWD3-217ENST00000621474 WDR73Q6P4I2 378 aa9.84□□□□□ -0.83
CBWD3-217ENST00000621474 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
CBWD3-217ENST00000621474 PRADC1Q9BSG0 188 aa9.84□□□□□ -0.83
CBWD3-217ENST00000621474 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
CBWD3-217ENST00000621474 HIGD1CA8MV81 97 aa9.83□□□□□ -0.84
CBWD3-217ENST00000621474 FAM3BP58499 235 aaPredicted RBP9.83□□□□□ -0.84
CBWD3-217ENST00000621474 OR10G8Q8NGN5 311 aa9.83□□□□□ -0.84
CBWD3-217ENST00000621474 PGLYRP4Q96LB8 373 aa9.83□□□□□ -0.84
CBWD3-217ENST00000621474 GFRA4Q9GZZ7 299 aa9.83□□□□□ -0.84
CBWD3-217ENST00000621474 MRPS16Q9Y3D3 137 aaKnown RBP9.83□□□□□ -0.84
CBWD3-217ENST00000621474 LINC00862A6NCI5 91 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 FAM231BA6NCW3 169 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 RAB4BP61018 213 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 ZNF56Q15929 161 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 COMMD7Q86VX2 200 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 C15orf54Q8N8G6 183 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
CBWD3-217ENST00000621474 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 GAGE1Q13065 139 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 GAGE4Q13068 117 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 GAGE5Q13069 117 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 TWIST1Q15672 202 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 Q6ZR54 194 aa9.81□□□□□ -0.84
CBWD3-217ENST00000621474 TRGC1P0CF51 173 aa9.8□□□□□ -0.84
CBWD3-217ENST00000621474 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
CBWD3-217ENST00000621474 Q9H8V8 135 aa9.8□□□□□ -0.84
CBWD3-217ENST00000621474 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 FAT2Q9NYQ8 4349 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 TRBV10-1A0A0K0K1A3 114 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 SMIM27A0A1W2PRY6 76 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 SMIM17P0DL12 118 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 PNRC1Q12796 327 aaPredicted RBP9.79□□□□□ -0.84
CBWD3-217ENST00000621474 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 KRTAP1-5Q9BYS1 174 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
CBWD3-217ENST00000621474 M0QY20 66 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 M0R2N4 97 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 MGPP08493 103 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 TIRAPP58753 221 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 SUMO4Q6EEV6 95 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 F5H697 171 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 UBE2D3P61077 147 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 UBE2D2P62837 147 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 GTSF1LQ9H1H1 148 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 NAT8BQ9UHF3 227 aa9.78□□□□□ -0.84
CBWD3-217ENST00000621474 TRBV7-3A0A075B6L6 115 aa9.77□□□□□ -0.85
CBWD3-217ENST00000621474 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
CBWD3-217ENST00000621474 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
CBWD3-217ENST00000621474 F8W036 122 aa9.76□□□□□ -0.85
CBWD3-217ENST00000621474 C10orf91Q5T1B1 145 aa9.76□□□□□ -0.85
CBWD3-217ENST00000621474 TRAV26-2A0A0B4J265 109 aa9.75□□□□□ -0.85
CBWD3-217ENST00000621474 SIVA1O15304 175 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms