RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 OR2T35Q8NGX2 323 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 ATP6V0E2Q8NHE4 81 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 PTH2Q96A98 100 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 ACTR3CQ9C0K3 210 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-210ENST00000621245 GTSF1LQ9H1H1 148 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 MED28Q9H204 178 aa7.58□□□□□ -1.2
CPNE3-210ENST00000621245 DAZ3Q9NR90 486 aaKnown RBP7.58□□□□□ -1.2
CPNE3-210ENST00000621245 FXYD6-FXYD2A0A087WZ82 144 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 GRIFINA4D1Z8 144 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 M0R036 132 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 PEX7O00628 323 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 GIPP09681 153 aaPredicted RBP7.57□□□□□ -1.2
CPNE3-210ENST00000621245 SERF2P84101 59 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 ZFP69Q49AA0 526 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 TNFSF18Q9UNG2 199 aa7.57□□□□□ -1.2
CPNE3-210ENST00000621245 TNXBP22105 4242 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 A0A1W2PRE2 83 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 FAM74A7A6NL05 159 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 PRSS47A8MTI9 375 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 KRBOX1C9JBD0 128 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 K7EQM0 130 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 SH2D1AO60880 128 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 PTTG1O95997 202 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 MBP02144 154 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 MGST1P10620 155 aaKnown RBP7.56□□□□□ -1.2
CPNE3-210ENST00000621245 LGALSLQ3ZCW2 172 aaPredicted RBP7.56□□□□□ -1.2
CPNE3-210ENST00000621245 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
CPNE3-210ENST00000621245 TMSB15BA0A087X1C1 80 aa7.55□□□□□ -1.2
CPNE3-210ENST00000621245 CTXND1A0A1B0GTU2 59 aa7.55□□□□□ -1.2
CPNE3-210ENST00000621245 B4DEV8 164 aa7.55□□□□□ -1.2
CPNE3-210ENST00000621245 IFNA7P01567 189 aa7.55□□□□□ -1.2
CPNE3-210ENST00000621245 ASIPP42127 132 aa7.55□□□□□ -1.2
CPNE3-210ENST00000621245 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-210ENST00000621245 CYTL1Q9NRR1 136 aa7.55□□□□□ -1.2
CPNE3-210ENST00000621245 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.54□□□□□ -1.2
CPNE3-210ENST00000621245 A8MWV9 139 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 SMLR1H3BR10 107 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 CIDEAO60543 219 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 ARMS2P0C7Q2 107 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 S100A4P26447 101 aaKnown RBP7.54□□□□□ -1.2
CPNE3-210ENST00000621245 FHITP49789 147 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 LAGE3Q14657 143 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 SAPCD1Q5SSQ6 148 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 ZFP2Q6ZN57 461 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 IL36BQ9NZH7 164 aa7.54□□□□□ -1.2
CPNE3-210ENST00000621245 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
CPNE3-210ENST00000621245 FAM74A4Q5TZK3 123 aa7.53□□□□□ -1.2
CPNE3-210ENST00000621245 Q6ZSA8 131 aa7.53□□□□□ -1.2
CPNE3-210ENST00000621245 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
CPNE3-210ENST00000621245 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
CPNE3-210ENST00000621245 RPL19P84098 196 aaKnown RBP7.52□□□□□ -1.21
CPNE3-210ENST00000621245 DNLZQ5SXM8 178 aa7.52□□□□□ -1.21
CPNE3-210ENST00000621245 COX8CQ7Z4L0 72 aa7.52□□□□□ -1.21
CPNE3-210ENST00000621245 SYT8Q8NBV8 401 aa7.52□□□□□ -1.21
CPNE3-210ENST00000621245 INO80EQ8NBZ0 244 aaPredicted RBP7.52□□□□□ -1.21
CPNE3-210ENST00000621245 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
CPNE3-210ENST00000621245 BORCS7-ASMTA0A0B4J1R7 106 aa7.51□□□□□ -1.21
CPNE3-210ENST00000621245 M0R381 172 aa7.51□□□□□ -1.21
CPNE3-210ENST00000621245 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
CPNE3-210ENST00000621245 NIT1Q86X76 327 aa7.51□□□□□ -1.21
CPNE3-210ENST00000621245 OR11H4Q8NGC9 324 aa7.51□□□□□ -1.21
CPNE3-210ENST00000621245 SFRP2Q96HF1 295 aa7.51□□□□□ -1.21
CPNE3-210ENST00000621245 A0A1B0GV50 99 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 ARPC5O15511 151 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 ZNF674Q2M3X9 581 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 AKR1C8PQ5T2L2 129 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 FAM162BQ5T6X4 162 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
CPNE3-210ENST00000621245 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 F5H697 171 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 LTAP01374 205 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 CST9LP1Q5W188 147 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 OR10AG1Q8NH19 301 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 FMC1Q96HJ9 113 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 TM2D2Q9BX73 214 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 BATF3Q9NR55 127 aa7.49□□□□□ -1.21
CPNE3-210ENST00000621245 IGKV2D-24A0A075B6R9 120 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 TRAV8-3A0A0A6YYJ7 113 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 TRBV6-1A0A0K0K1D8 114 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 RHODO00212 210 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 PAGE4O60829 102 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 KRTAP10-4P60372 401 aaPredicted RBP7.48□□□□□ -1.21
CPNE3-210ENST00000621245 UBE2D3P61077 147 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 UBE2G1P62253 170 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 UBE2D2P62837 147 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 ZFP30Q9Y2G7 519 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 PHLDA3Q9Y5J5 127 aa7.48□□□□□ -1.21
CPNE3-210ENST00000621245 C1QBP02746 253 aa7.47□□□□□ -1.21
CPNE3-210ENST00000621245 TPT1P13693 172 aaKnown RBP7.47□□□□□ -1.21
CPNE3-210ENST00000621245 AKR1C3P42330 323 aa7.47□□□□□ -1.21
CPNE3-210ENST00000621245 UBE2WQ96B02 151 aa7.47□□□□□ -1.21
CPNE3-210ENST00000621245 A0A087WWC5 75 aa7.46□□□□□ -1.22
CPNE3-210ENST00000621245 MPV17L2Q567V2 206 aa7.46□□□□□ -1.22
CPNE3-210ENST00000621245 CFAP161Q6P656 301 aa7.46□□□□□ -1.22
CPNE3-210ENST00000621245 ZFP82Q8N141 532 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms