RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 GATA3P23771 443 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 ZFP2Q6ZN57 461 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 UBE2E2Q96LR5 201 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 ATP6V0BQ99437 205 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 TP53TG1Q9Y2A0 90 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 TRAV13-1A0A0B4J241 112 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 LINC01548A6NM66 108 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 E9PLD3 99 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 IGF1P05019 195 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 SPINK8P0C7L1 97 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 UBE2E1P51965 193 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 ZNF575Q86XF7 245 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 SRSF8Q9BRL6 282 aaKnown RBP5.35□□□□□ -1.55
NEDD9-216ENST00000620854 ABCA12Q86UK0 2595 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 F8W1H4 67 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 IGHG4P01861 327 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 CTSGP08311 255 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 IGLC6P0CF74 106 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 SYNJ2BPP57105 145 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 SPINK13Q1W4C9 94 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 STHQ8IWL8 128 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 CHCHD5Q9BSY4 110 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 TRAV12-2A0A075B6T6 113 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 TRAV8-3A0A0A6YYJ7 113 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 TRAV8-4A0A0B4J246 113 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 F6UB75 175 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 PF4P02776 101 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 Q96MF0 132 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 AGPAT4-IT1Q9H0P7 198 aa5.35□□□□□ -1.55
NEDD9-216ENST00000620854 DUSP14O95147 198 aaKnown RBP5.34□□□□□ -1.55
NEDD9-216ENST00000620854 ANXA2RQ3ZCQ2 193 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 C2orf82Q6UX34 121 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 C8orf86Q6ZUL3 223 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 COPS9Q8WXC6 57 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 PRADC1Q9BSG0 188 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 KLK9Q9UKQ9 250 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 CSMD2Q7Z408 3487 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 F8W735 103 aaPredicted RBP5.34□□□□□ -1.55
NEDD9-216ENST00000620854 TNFRSF13BO14836 293 aaPredicted RBP5.34□□□□□ -1.55
NEDD9-216ENST00000620854 LINC00158P58513 81 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 RPL39LQ96EH5 51 aaKnown RBP5.34□□□□□ -1.55
NEDD9-216ENST00000620854 TM2D2Q9BX73 214 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 TRBV7-1A0A0A6YYK4 115 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 TRGV4A0A0C4DH28 118 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 IGHV3-16A0A0C4DH30 117 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 ZFAND6Q6FIF0 208 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 Q8N8P6 123 aa5.34□□□□□ -1.55
NEDD9-216ENST00000620854 CRYBG3Q68DQ2 2970 aa5.34□□□□□ -1.56
NEDD9-216ENST00000620854 HRNRQ86YZ3 2850 aaPredicted RBP5.34□□□□□ -1.56
NEDD9-216ENST00000620854 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 GATD1Q8NB37 220 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 HIGD1BQ9P298 99 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 VPS13CQ709C8 3753 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 TRBV6-1A0A0K0K1D8 114 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 SDHAF1A6NFY7 115 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 LINC01559Q495D7 138 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 FN1P02751 2386 aaKnown RBP5.33□□□□□ -1.56
NEDD9-216ENST00000620854 IGLV11-55A0A075B6I3 123 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 TRGV11A0A075B6L2 103 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV1-69DA0A0B4J2H0 117 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV1-69P01742 117 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 MT-ATP8P03928 68 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 CRYBA4P53673 196 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 DEFB131AP59861 70 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 RNASE13Q5GAN3 156 aaKnown RBP5.33□□□□□ -1.56
NEDD9-216ENST00000620854 C8orf31Q8N9H6 132 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 ZMAT4Q9H898 229 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 A0A087WX48 190 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 PLEKHB2Q96CS7 222 aa5.33□□□□□ -1.56
NEDD9-216ENST00000620854 DAZ1Q9NQZ3 744 aaKnown RBP5.33□□□□□ -1.56
NEDD9-216ENST00000620854 MYMXA0A1B0GTQ4 84 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 PAX4O43316 350 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV3-38A0A0C4DH36 116 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV4-61A0A0C4DH41 118 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 F8VRH5 84 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 C19orf84I3L1E1 186 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 NFE4Q86UQ8 179 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 PRIMA1Q86XR5 153 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 NRGNQ92686 78 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 TIMM21Q9BVV7 248 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 SMIM2Q9BVW6 85 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 PEMTQ9UBM1 199 aa5.32□□□□□ -1.56
NEDD9-216ENST00000620854 IGHV4-30-2A0A087WSY4 118 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-216ENST00000620854 FOXI1Q12951 378 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 DEFB113Q30KQ7 82 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 ZNF843Q8N446 348 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 FAM110DQ8TAY7 271 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-216ENST00000620854 XCL2Q9UBD3 114 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 PRSS29PA6NIE9 313 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 GNRH2O43555 120 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 RPL35AP18077 110 aaKnown RBP5.31□□□□□ -1.56
NEDD9-216ENST00000620854 MORN3Q6PF18 240 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-216ENST00000620854 NRACQ8N912 160 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 IGLV2-18A0A075B6J9 118 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 BUB3O43684 328 aa5.31□□□□□ -1.56
NEDD9-216ENST00000620854 LGALS1P09382 135 aaKnown RBP5.31□□□□□ -1.56
NEDD9-216ENST00000620854 J3QLI3 93 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms