RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KLHL30-AS1Q8NEE0 82 aa7.93□□□□□ -1.14
VPS11-207ENST00000620429 PSMG3-AS1Q96PY0 264 aa7.93□□□□□ -1.14
VPS11-207ENST00000620429 ZGRF1Q86YA3 2104 aa7.93□□□□□ -1.14
VPS11-207ENST00000620429 TLN1Q9Y490 2541 aaKnown RBP7.93□□□□□ -1.14
VPS11-207ENST00000620429 H7C423 109 aa7.93□□□□□ -1.14
VPS11-207ENST00000620429 NRACQ8N912 160 aa7.93□□□□□ -1.14
VPS11-207ENST00000620429 PKDREJQ9NTG1 2253 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 ZNF462Q96JM2 2506 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 C17orf100A8MU93 164 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 IGHV4-39P01824 125 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 ZNF22P17026 224 aaPredicted RBP7.92□□□□□ -1.14
VPS11-207ENST00000620429 Q6ZS46 218 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 TOMM6Q96B49 74 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 C17orf77Q96MU5 243 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
VPS11-207ENST00000620429 CFHR4Q92496 578 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 SCGB3A1Q96QR1 104 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 MALRD1Q5VYJ5 2156 aa7.92□□□□□ -1.14
VPS11-207ENST00000620429 SDIM1Q6ZPB5 146 aa7.91□□□□□ -1.14
VPS11-207ENST00000620429 IL17RELQ6ZVW7 336 aa7.91□□□□□ -1.14
VPS11-207ENST00000620429 JPT2Q9H910 190 aa7.91□□□□□ -1.14
VPS11-207ENST00000620429 hADV29S1A0JD25 119 aa7.91□□□□□ -1.14
VPS11-207ENST00000620429 ATOX1O00244 68 aa7.91□□□□□ -1.14
VPS11-207ENST00000620429 ERCC8Q13216 396 aa7.9□□□□□ -1.14
VPS11-207ENST00000620429 ORMDL2Q53FV1 153 aa7.9□□□□□ -1.14
VPS11-207ENST00000620429 GFRALQ6UXV0 394 aa7.9□□□□□ -1.14
VPS11-207ENST00000620429 LINC00311Q8N616 119 aa7.9□□□□□ -1.14
VPS11-207ENST00000620429 UBR5O95071 2799 aaPredicted RBP7.9□□□□□ -1.14
VPS11-207ENST00000620429 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.9□□□□□ -1.15
VPS11-207ENST00000620429 M0R3E3 92 aa7.9□□□□□ -1.15
VPS11-207ENST00000620429 NDUFB3O43676 98 aa7.9□□□□□ -1.15
VPS11-207ENST00000620429 PAPPA-AS1Q5QFB9 102 aa7.9□□□□□ -1.15
VPS11-207ENST00000620429 LYPD2Q6UXB3 125 aa7.9□□□□□ -1.15
VPS11-207ENST00000620429 TENM4Q6N022 2769 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 SETXQ7Z333 2677 aaKnown RBP7.89□□□□□ -1.15
VPS11-207ENST00000620429 TINCRA0A1B0GVN0 87 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 C3orf36Q3SXR2 165 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 CCL17Q92583 94 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 LINC00477Q96M19 166 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 PYGO1Q9Y3Y4 419 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 CFAP46Q8IYW2 2715 aa7.89□□□□□ -1.15
VPS11-207ENST00000620429 BSPH1Q075Z2 132 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 FAM19A4Q96LR4 140 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 AMELXQ99217 191 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 SHANK2-AS3Q9BTD1 123 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 CYSTM1Q9H1C7 97 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 SPTA1P02549 2419 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 CYSRT1A8MQ03 144 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 TRIAP1O43715 76 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 IGKV1-17P01599 117 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 PRB3Q04118 309 aaPredicted RBP7.88□□□□□ -1.15
VPS11-207ENST00000620429 PDE6HQ13956 83 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 Q1RN00 199 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 SMCR5Q8TEV8 140 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 SMIM2Q9BVW6 85 aa7.88□□□□□ -1.15
VPS11-207ENST00000620429 ZNF80P51504 273 aaPredicted RBP7.87□□□□□ -1.15
VPS11-207ENST00000620429 DLX1P56177 255 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 C8orf31Q8N9H6 132 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 TEX22C9J3V5 150 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 H3BRN7 92 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 H7C2G1 150 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 I3L2K1 104 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 IGHV1-8P0DP01 117 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 SEC61GP60059 68 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 AGPAT4-IT1Q9H0P7 198 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 LOXP28300 417 aaPredicted RBP7.87□□□□□ -1.15
VPS11-207ENST00000620429 DSCR8Q96T75 97 aa7.87□□□□□ -1.15
VPS11-207ENST00000620429 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
VPS11-207ENST00000620429 TSPEAR-AS2P59090 65 aa7.86□□□□□ -1.15
VPS11-207ENST00000620429 UPK3BQ9BT76 320 aa7.86□□□□□ -1.15
VPS11-207ENST00000620429 NBASA2RRP1 2371 aa7.86□□□□□ -1.15
VPS11-207ENST00000620429 IGLV4-69A0A075B6H9 119 aa7.86□□□□□ -1.15
VPS11-207ENST00000620429 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
VPS11-207ENST00000620429 C14orf178Q8N769 122 aaPredicted RBP7.86□□□□□ -1.15
VPS11-207ENST00000620429 TRAV41A0A0B4J266 112 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 ZNF491Q8N8L2 437 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 NUP37Q8NFH4 326 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 RNF125Q96EQ8 232 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 FLNBO75369 2602 aaKnown RBP7.85□□□□□ -1.15
VPS11-207ENST00000620429 LST1O00453 97 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 RS1O15537 224 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 TRGV3P03979 118 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 S4R3C0 116 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 LRBAP50851 2863 aa7.85□□□□□ -1.15
VPS11-207ENST00000620429 COX6CP09669 75 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 MUSTN1Q8IVN3 82 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 C1orf43Q9BWL3 253 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 KLK15Q9H2R5 256 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 BEX4Q9NWD9 120 aaPredicted RBP7.84□□□□□ -1.15
VPS11-207ENST00000620429 IGKV2-40A0A087WW87 121 aaPredicted RBP7.84□□□□□ -1.15
VPS11-207ENST00000620429 IGHV1-3A0A0C4DH29 117 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 IGKV2D-40P01614 121 aaPredicted RBP7.84□□□□□ -1.15
VPS11-207ENST00000620429 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 PEMTQ9UBM1 199 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 ICOSQ9Y6W8 199 aa7.84□□□□□ -1.15
VPS11-207ENST00000620429 POLEQ07864 2286 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms