RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ZFAND6Q6FIF0 208 aa14.66□□□□□ -0.06
LAPTM4B-204ENST00000619747 GTSCR1Q86UQ5 136 aa14.66□□□□□ -0.06
LAPTM4B-204ENST00000619747 SPRY2O43597 315 aa14.66□□□□□ -0.06
LAPTM4B-204ENST00000619747 CFHR3Q02985 330 aa14.66□□□□□ -0.06
LAPTM4B-204ENST00000619747 IGKV3D-20A0A0C4DH25 116 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 HBDP02042 147 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 RRN3P1Q2M238 152 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 TEX29Q8N6K0 151 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 CCDC179H3BU77 68 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 H3BUA1 57 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 COX8CQ7Z4L0 72 aa14.65□□□□□ -0.06
LAPTM4B-204ENST00000619747 TRBV20-1A0A075B6N2 111 aa14.64□□□□□ -0.07
LAPTM4B-204ENST00000619747 PSMB8P28062 276 aa14.64□□□□□ -0.07
LAPTM4B-204ENST00000619747 ODF1Q14990 250 aa14.64□□□□□ -0.07
LAPTM4B-204ENST00000619747 PRR9Q5T870 116 aa14.64□□□□□ -0.07
LAPTM4B-204ENST00000619747 SFTA2Q6UW10 78 aa14.64□□□□□ -0.07
LAPTM4B-204ENST00000619747 HHLA3Q9XRX5 114 aa14.64□□□□□ -0.07
LAPTM4B-204ENST00000619747 J3QLI3 93 aa14.63□□□□□ -0.07
LAPTM4B-204ENST00000619747 ID1P41134 155 aa14.63□□□□□ -0.07
LAPTM4B-204ENST00000619747 KIR2DL4Q99706 377 aa14.63□□□□□ -0.07
LAPTM4B-204ENST00000619747 CFAP126Q5VTH2 177 aa14.63□□□□□ -0.07
LAPTM4B-204ENST00000619747 DAZ1Q9NQZ3 744 aaKnown RBP14.63□□□□□ -0.07
LAPTM4B-204ENST00000619747 RBAKDNA6NC62 111 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAS8-AS1O95177 125 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 VPREB3Q9UKI3 123 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 IGLC6P0CF74 106 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 FAM104BQ5XKR9 115 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 CARD19Q96LW7 228 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 IGHV7-4-1A0A0J9YVY3 117 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 MRPL51Q4U2R6 128 aaKnown RBP14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 C9orf139Q6ZV77 190 aa14.62□□□□□ -0.07
LAPTM4B-204ENST00000619747 MAPKAPK5-AS1Q8N8E1 139 aa14.61□□□□□ -0.07
LAPTM4B-204ENST00000619747 WFDC11Q8NEX6 87 aa14.61□□□□□ -0.07
LAPTM4B-204ENST00000619747 C9orf47Q6ZRZ4 202 aa14.61□□□□□ -0.07
LAPTM4B-204ENST00000619747 HECTD1Q9ULT8 2610 aa14.6□□□□□ -0.07
LAPTM4B-204ENST00000619747 ATP6V0E2Q8NHE4 81 aa14.6□□□□□ -0.07
LAPTM4B-204ENST00000619747 CKS2P33552 79 aa14.6□□□□□ -0.07
LAPTM4B-204ENST00000619747 Q6YL49 198 aa14.6□□□□□ -0.07
LAPTM4B-204ENST00000619747 ZNF493Q6ZR52 646 aa14.6□□□□□ -0.07
LAPTM4B-204ENST00000619747 HIST1H4GQ99525 98 aa14.6□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAGE12JA6NER3 117 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAGE7O76087 117 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAGE12FP0CL80 117 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAGE12GP0CL81 117 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAGE12IP0CL82 117 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 GAGE4Q13068 117 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 ZC2HC1BQ5TFG8 222 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 OR10J6PQ8NGY7 276 aa14.59□□□□□ -0.07
LAPTM4B-204ENST00000619747 SOCS3O14543 225 aa14.58□□□□□ -0.07
LAPTM4B-204ENST00000619747 SYNJ2BPP57105 145 aa14.58□□□□□ -0.07
LAPTM4B-204ENST00000619747 LINC01559Q495D7 138 aa14.58□□□□□ -0.07
LAPTM4B-204ENST00000619747 FASNP49327 2511 aaKnown RBP14.58□□□□□ -0.08
LAPTM4B-204ENST00000619747 EVI2AP22794 236 aa14.58□□□□□ -0.08
LAPTM4B-204ENST00000619747 ORMDL3Q8N138 153 aa14.58□□□□□ -0.08
LAPTM4B-204ENST00000619747 NOTCH3Q9UM47 2321 aa14.58□□□□□ -0.08
LAPTM4B-204ENST00000619747 PRSS1P07477 247 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 GATA1P15976 413 aaPredicted RBP14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 DEFB136Q30KP8 78 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 NPYP01303 97 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 PSMB2P49721 201 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 C18orf65Q6ZTR6 163 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 KRTAP1-3Q8IUG1 177 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 PSMG3-AS1Q96PY0 264 aa14.57□□□□□ -0.08
LAPTM4B-204ENST00000619747 RNASE4P34096 147 aaKnown RBP14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 MORN3Q6PF18 240 aaPredicted RBP14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 MRPL53Q96EL3 112 aaKnown RBP14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 ZNF702PQ9H963 129 aa14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 H3BVH4 76 aa14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 IGKV3-20P01619 116 aa14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 UNC79Q9P2D8 2635 aa14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 FSHBP01225 129 aa14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 IGKCP01834 107 aa14.56□□□□□ -0.08
LAPTM4B-204ENST00000619747 NDUFV3P56181 108 aaKnown RBP14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 GATD1Q8NB37 220 aa14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 PPDPFLQ8WWR9 84 aa14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 DUX3Q96PT4 197 aa14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 ZFAND2AQ8N6M9 145 aa14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 DLX4Q92988 240 aaPredicted RBP14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
LAPTM4B-204ENST00000619747 NIPBLQ6KC79 2804 aaeCLIP14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 IGHV4OR15-8A0A075B7B6 117 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 A0A087WW49 117 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 A0A087WX48 190 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 ZNF688P0C7X2 276 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 ZFP2Q6ZN57 461 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 YAE1D1Q9NRH1 226 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 TMEM160Q9NX00 188 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 PDZD2O15018 2839 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 LOC107984156A0A0G2JMH3 177 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 ARL17AQ8IVW1 177 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 CITED1Q99966 193 aa14.54□□□□□ -0.08
LAPTM4B-204ENST00000619747 TRAV26-2A0A0B4J265 109 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 KHDC1LQ5JSQ8 128 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 SPANXN1Q5VSR9 72 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 RNF185Q96GF1 192 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 LINC00477Q96M19 166 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 ZMAT4Q9H898 229 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 FOXC2Q99958 501 aa14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 GCN1Q92616 2671 aaKnown RBP14.53□□□□□ -0.08
LAPTM4B-204ENST00000619747 OVOL1O14753 267 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms