RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 HLA-DMBP28068 263 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 PMVKQ15126 192 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 POLQO75417 2590 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 TRGV11A0A075B6L2 103 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 A0A0J9YY99 117 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 LGALS9O00182 355 aa12.09□□□□□ -0.47
SEMA3B-214ENST00000619119 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
SEMA3B-214ENST00000619119 RBAKDNA6NC62 111 aa12.08□□□□□ -0.48
SEMA3B-214ENST00000619119 LY6LH3BQJ8 138 aa12.08□□□□□ -0.48
SEMA3B-214ENST00000619119 HERVK_113P61574 105 aa12.08□□□□□ -0.48
SEMA3B-214ENST00000619119 DUX3Q96PT4 197 aa12.08□□□□□ -0.48
SEMA3B-214ENST00000619119 TRAV12-1A0A0B4J245 112 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 COX6B1P14854 86 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 IGFL4Q6B9Z1 124 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 DYNAPQ8N1N2 210 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 IGHV3-30P01768 117 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 IGHV3-30-5P0DP03 117 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 TMEM101Q96IK0 257 aa12.07□□□□□ -0.48
SEMA3B-214ENST00000619119 BBC3Q96PG8 261 aaPredicted RBP12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 SHANK2-AS3Q9BTD1 123 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 M0R1W7 72 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 CRYGBP07316 175 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 ATXN8Q156A1 80 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 C2orf82Q6UX34 121 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 IL17RELQ6ZVW7 336 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 C3orf22Q8N5N4 141 aa12.06□□□□□ -0.48
SEMA3B-214ENST00000619119 NEXN-AS1Q8NBZ9 246 aa12.05□□□□□ -0.48
SEMA3B-214ENST00000619119 OR13C6PQ8NH95 151 aa12.05□□□□□ -0.48
SEMA3B-214ENST00000619119 LRRC75A-AS1Q8N1F1 130 aa12.05□□□□□ -0.48
SEMA3B-214ENST00000619119 NRACQ8N912 160 aa12.05□□□□□ -0.48
SEMA3B-214ENST00000619119 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 RPL13AP40429 203 aaKnown RBP12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 WIPF1O43516 503 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 H3BRN7 92 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 M0R2P5 195 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 CFHR4Q92496 578 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 S4R3C0 116 aa12.04□□□□□ -0.48
SEMA3B-214ENST00000619119 ODF3BA8MYP8 253 aa12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 ZNF575Q86XF7 245 aa12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 LYPD1Q8N2G4 141 aa12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 CCL19Q99731 98 aa12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 TEX22C9J3V5 150 aa12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
SEMA3B-214ENST00000619119 TRBV10-2A0A0K0K1G8 114 aa12.02□□□□□ -0.48
SEMA3B-214ENST00000619119 NBR2O15453 112 aa12.02□□□□□ -0.48
SEMA3B-214ENST00000619119 IGKV1-17P01599 117 aa12.02□□□□□ -0.48
SEMA3B-214ENST00000619119 LMO4P61968 165 aa12.02□□□□□ -0.48
SEMA3B-214ENST00000619119 C14orf178Q8N769 122 aaPredicted RBP12.02□□□□□ -0.49
SEMA3B-214ENST00000619119 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.49
SEMA3B-214ENST00000619119 TMEM170BQ5T4T1 132 aa12.02□□□□□ -0.49
SEMA3B-214ENST00000619119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.02□□□□□ -0.498e-13■■■□□ 14.6
SEMA3B-214ENST00000619119 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.49
SEMA3B-214ENST00000619119 F5H768 121 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 LINC00527Q9UJ94 153 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 ABCA2Q9BZC7 2435 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 SMIM2Q9BVW6 85 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 SIRPDQ9H106 197 aa12.01□□□□□ -0.49
SEMA3B-214ENST00000619119 MFAP4P55083 255 aa12□□□□□ -0.49
SEMA3B-214ENST00000619119 UQCRQO14949 82 aa12□□□□□ -0.49
SEMA3B-214ENST00000619119 CNFNQ9BYD5 112 aa12□□□□□ -0.49
SEMA3B-214ENST00000619119 PTPN13Q12923 2485 aa12□□□□□ -0.49
SEMA3B-214ENST00000619119 RNF125Q96EQ8 232 aa12□□□□□ -0.49
SEMA3B-214ENST00000619119 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
SEMA3B-214ENST00000619119 C2orf66Q6UXQ4 117 aa11.99□□□□□ -0.49
SEMA3B-214ENST00000619119 SLC25A29Q8N8R3 303 aa11.99□□□□□ -0.49
SEMA3B-214ENST00000619119 ERCC8Q13216 396 aa11.99□□□□□ -0.49
SEMA3B-214ENST00000619119 GAGE2AQ6NT46 116 aa11.99□□□□□ -0.49
SEMA3B-214ENST00000619119 POM121L12Q8N7R1 296 aa11.99□□□□□ -0.49
SEMA3B-214ENST00000619119 IGHV4-61A0A0C4DH41 118 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 TMEM263Q8WUH6 116 aaKnown RBP11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 P0DMU3 169 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 FAM231AP0DMU4 169 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 FAM231CP0DMU5 169 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 SAA4P35542 130 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 TOMM6Q96B49 74 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 EBI3Q14213 229 aa11.98□□□□□ -0.49
SEMA3B-214ENST00000619119 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 RNF5Q99942 180 aa11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 A0A1B0GX51 115 aa11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 NDPQ00604 133 aa11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 ORMDL2Q53FV1 153 aa11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 ZNF256Q9Y2P7 627 aaPredicted RBP11.97□□□□□ -0.49
SEMA3B-214ENST00000619119 TRIAP1O43715 76 aa11.96□□□□□ -0.49
SEMA3B-214ENST00000619119 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
SEMA3B-214ENST00000619119 TRAV41A0A0B4J266 112 aa11.96□□□□□ -0.5
SEMA3B-214ENST00000619119 SPRY2O43597 315 aa11.96□□□□□ -0.5
SEMA3B-214ENST00000619119 H7C423 109 aa11.95□□□□□ -0.5
SEMA3B-214ENST00000619119 BRD3OSQ6XYD6 125 aa11.95□□□□□ -0.5
SEMA3B-214ENST00000619119 IGHV4-30-2A0A087WSY4 118 aa11.95□□□□□ -0.5
SEMA3B-214ENST00000619119 HRCT1Q6UXD1 115 aa11.95□□□□□ -0.5
SEMA3B-214ENST00000619119 TMEM219Q86XT9 240 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms