RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 MYCNOSP40205 109 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
SMARCA1-205ENST00000617310 A0A087X0K7 114 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 M0R2P5 195 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 CD5LO43866 347 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 PRB2P02812 416 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 RBMY1A1P0DJD3 496 aaKnown RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 RBMY1CP0DJD4 496 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 RASL10AQ92737 203 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 GFRA4Q9GZZ7 299 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 HCFC1P51610 2035 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 I3L3M4 83 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 Q6YL49 198 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 KMT2EQ8IZD2 1858 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 IGKV2D-24A0A075B6R9 120 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 SEC11AP67812 179 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 GPHB5Q86YW7 130 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 CT83Q5H943 113 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 SMIM2Q9BVW6 85 aa7.78□□□□□ -1.16
SMARCA1-205ENST00000617310 SCGB1A1P11684 91 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 XCL1P47992 114 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 Q8N1Y9 231 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 LINC00482Q8N8I6 264 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 LINC00587B1AMM8 73 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 LTAP01374 205 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 IGHG4P01861 327 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 GYPEP15421 78 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 PAX2Q02962 417 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 ZNF124Q15973 351 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 SPCS1Q9Y6A9 102 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 FAM231BA6NCW3 169 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 SLC25A20O43772 301 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 KLF5Q13887 457 aaPredicted RBP7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 SIGLEC8Q9NYZ4 499 aa7.77□□□□□ -1.17
SMARCA1-205ENST00000617310 K7ERU9 68 aa7.76□□□□□ -1.17
SMARCA1-205ENST00000617310 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
SMARCA1-205ENST00000617310 MEGF9Q9H1U4 602 aa7.76□□□□□ -1.17
SMARCA1-205ENST00000617310 SPART-AS1P0CW21 52 aa7.76□□□□□ -1.17
SMARCA1-205ENST00000617310 RHOHQ15669 191 aa7.76□□□□□ -1.17
SMARCA1-205ENST00000617310 INS-IGF2F8WCM5 200 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 UBE2CO00762 179 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 IGLL1P15814 213 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 IGKV1D-37A0A075B6S9 117 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 C4orf3Q8WVX3 66 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 FAM110AQ9BQ89 295 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 PGPEP1Q9NXJ5 209 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 C5orf38Q86SI9 138 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 LRP4O75096 1905 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 LINC01549A6NIU2 74 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 TMEM238C9JI98 176 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 IGHV3-30P01768 117 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 IGHV3-33P01772 117 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 ATP5G1P05496 136 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 IGHV3-30-3P0DP02 117 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 IGHV3-30-5P0DP03 117 aa7.75□□□□□ -1.17
SMARCA1-205ENST00000617310 C18orf65Q6ZTR6 163 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 LINC01006Q8NI28 216 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 LINC00574Q9H8X3 128 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 WI2-2373I1.2A0A1W2PRP0 233 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 Q8N8P6 123 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 MDFICQ9P1T7 246 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 NUP210LQ5VU65 1888 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 K7EMT4 169 aa7.74□□□□□ -1.17
SMARCA1-205ENST00000617310 SMIM27A0A1W2PRY6 76 aa7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 FLNAP21333 2647 aaKnown RBP7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 LOC105371267A0A1B0GV96 52 aa7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 ESDP10768 282 aa7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 ORAOV1Q8WV07 137 aa7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 LENEPQ9Y5L5 61 aa7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 DSPP15924 2871 aaKnown RBP7.73□□□□□ -1.17
SMARCA1-205ENST00000617310 MYMXA0A1B0GTQ4 84 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 P0C879 139 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 PMVKQ15126 192 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 PRSS29PA6NIE9 313 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 IGF1P05019 195 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 NDUFAF3Q9BU61 184 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 MAP6D1Q9H9H5 199 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 IGLL5B9A064 214 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 ZNF295-AS1Q8N0V1 137 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 ITPR3Q14573 2671 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 A0A0J9YX75 114 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 FRMD6-AS1P0C7T7 363 aa7.72□□□□□ -1.17
SMARCA1-205ENST00000617310 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.18
SMARCA1-205ENST00000617310 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms