RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 A0A0J9YY99 117 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 AKAP6Q13023 2319 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 TRAV12-3A0A0B4J271 114 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 K7EMT4 169 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 TSPAN13O95857 204 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 EDN2P20800 178 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 WFDC12Q8WWY7 111 aa13.06□□□□□ -0.32
DDX1-207ENST00000617198 SMAGPQ0VAQ4 97 aa13.05□□□□□ -0.32
DDX1-207ENST00000617198 LY6DQ14210 128 aa13.05□□□□□ -0.32
DDX1-207ENST00000617198 TRBV27A0A0K0K1C4 114 aa13.05□□□□□ -0.32
DDX1-207ENST00000617198 LGALS9O00182 355 aa13.05□□□□□ -0.32
DDX1-207ENST00000617198 CFAP126Q5VTH2 177 aa13.05□□□□□ -0.32
DDX1-207ENST00000617198 TRBV6-5A0A0K0K1A5 114 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 NDUFS8O00217 210 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 APOMO95445 188 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 INSL3P51460 131 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 CFHR3Q02985 330 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
DDX1-207ENST00000617198 LOC107984156A0A0G2JMH3 177 aa13.03□□□□□ -0.32
DDX1-207ENST00000617198 UBE2D3P61077 147 aa13.03□□□□□ -0.32
DDX1-207ENST00000617198 UBE2D2P62837 147 aa13.03□□□□□ -0.32
DDX1-207ENST00000617198 ARL17AQ8IVW1 177 aa13.03□□□□□ -0.32
DDX1-207ENST00000617198 PSMB2P49721 201 aa13.02□□□□□ -0.32
DDX1-207ENST00000617198 TSPEAR-AS2P59090 65 aa13.02□□□□□ -0.32
DDX1-207ENST00000617198 FAM74A4Q5TZK3 123 aa13.02□□□□□ -0.32
DDX1-207ENST00000617198 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.32
DDX1-207ENST00000617198 ZNRF2Q8NHG8 242 aa13.02□□□□□ -0.32
DDX1-207ENST00000617198 C10orf105Q8TEF2 133 aa13.02□□□□□ -0.32
DDX1-207ENST00000617198 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.33
DDX1-207ENST00000617198 LYRM7Q5U5X0 104 aa13.02□□□□□ -0.33
DDX1-207ENST00000617198 CLEC2AQ6UVW9 174 aa13.02□□□□□ -0.33
DDX1-207ENST00000617198 ATP6V0E2Q8NHE4 81 aa13.02□□□□□ -0.33
DDX1-207ENST00000617198 C9orf85Q96MD7 179 aa13.02□□□□□ -0.33
DDX1-207ENST00000617198 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.33
DDX1-207ENST00000617198 IGHV3-16A0A0C4DH30 117 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 SFTA2Q6UW10 78 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 ODF3Q96PU9 254 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 CELSR1Q9NYQ6 3014 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 IGHV3-30P01768 117 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 IGHV3-30-5P0DP03 117 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 FOXI1Q12951 378 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 SYT8Q8NBV8 401 aa13.01□□□□□ -0.33
DDX1-207ENST00000617198 ZNF256Q9Y2P7 627 aaPredicted RBP13.01□□□□□ -0.33
DDX1-207ENST00000617198 MDFICQ9P1T7 246 aa13□□□□□ -0.33
DDX1-207ENST00000617198 ZNF56Q15929 161 aa13□□□□□ -0.33
DDX1-207ENST00000617198 J3QQQ9 107 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 M0QY20 66 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 AMELXQ99217 191 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 CFC1P0CG37 223 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 RHOHQ15669 191 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 CCL19Q99731 98 aa12.99□□□□□ -0.33
DDX1-207ENST00000617198 TRAV12-2A0A075B6T6 113 aa12.98□□□□□ -0.33
DDX1-207ENST00000617198 A0A0J9YX75 114 aa12.98□□□□□ -0.33
DDX1-207ENST00000617198 LGALS3P17931 250 aaKnown RBP12.98□□□□□ -0.33
DDX1-207ENST00000617198 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
DDX1-207ENST00000617198 SPTAN1Q13813 2472 aaKnown RBP12.97□□□□□ -0.33
DDX1-207ENST00000617198 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 MSMBP08118 114 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 GNLYP22749 145 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 Q8N1Y9 231 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 PSMB8P28062 276 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 SNRPD3P62318 126 aaKnown RBP12.97□□□□□ -0.33
DDX1-207ENST00000617198 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
DDX1-207ENST00000617198 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
DDX1-207ENST00000617198 ZNF580Q9UK33 172 aa12.97□□□□□ -0.33
DDX1-207ENST00000617198 IGHV4-30-2A0A087WSY4 118 aa12.96□□□□□ -0.33
DDX1-207ENST00000617198 C10orf126Q8N4M7 172 aa12.96□□□□□ -0.33
DDX1-207ENST00000617198 TRBV20-1A0A075B6N2 111 aa12.96□□□□□ -0.34
DDX1-207ENST00000617198 OPRPNQ99935 248 aaPredicted RBP12.96□□□□□ -0.34
DDX1-207ENST00000617198 IGHV1OR15-1A0A075B7D0 117 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 CIDEAO60543 219 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 TCL1BO95988 128 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 P0DMU3 169 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 PRO1854Q9UHT4 67 aa12.95□□□□□ -0.34
DDX1-207ENST00000617198 VPS13CQ709C8 3753 aa12.94□□□□□ -0.34
DDX1-207ENST00000617198 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
DDX1-207ENST00000617198 K7EQG2 157 aa12.94□□□□□ -0.34
DDX1-207ENST00000617198 LEPROTO15243 131 aa12.94□□□□□ -0.34
DDX1-207ENST00000617198 ATP5J2P56134 94 aa12.94□□□□□ -0.34
DDX1-207ENST00000617198 SPINK13Q1W4C9 94 aa12.93□□□□□ -0.34
DDX1-207ENST00000617198 AVPP01185 164 aa12.93□□□□□ -0.34
DDX1-207ENST00000617198 C20orf203Q8NBC4 194 aa12.93□□□□□ -0.34
DDX1-207ENST00000617198 I3L3M4 83 aa12.92□□□□□ -0.34
DDX1-207ENST00000617198 TEN1Q86WV5 123 aa12.92□□□□□ -0.34
DDX1-207ENST00000617198 PTH2Q96A98 100 aa12.92□□□□□ -0.34
DDX1-207ENST00000617198 PPDPFLQ8WWR9 84 aa12.92□□□□□ -0.34
DDX1-207ENST00000617198 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
DDX1-207ENST00000617198 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
DDX1-207ENST00000617198 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
DDX1-207ENST00000617198 CDIP1Q9H305 208 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms