RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 EMP1P54849 157 aa11.64□□□□□ -0.55
GPN1-212ENST00000616939 GAGE5Q13069 117 aa11.64□□□□□ -0.55
GPN1-212ENST00000616939 GAGE6Q13070 117 aa11.64□□□□□ -0.55
GPN1-212ENST00000616939 USMG5Q96IX5 58 aa11.64□□□□□ -0.55
GPN1-212ENST00000616939 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
GPN1-212ENST00000616939 C9orf85Q96MD7 179 aa11.63□□□□□ -0.55
GPN1-212ENST00000616939 ODF3Q96PU9 254 aa11.63□□□□□ -0.55
GPN1-212ENST00000616939 TRBV30A0A0K0K1B3 111 aa11.63□□□□□ -0.55
GPN1-212ENST00000616939 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
GPN1-212ENST00000616939 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
GPN1-212ENST00000616939 CACNA1HO95180 2353 aa11.62□□□□□ -0.55
GPN1-212ENST00000616939 MRPL23Q16540 153 aaKnown RBP11.61□□□□□ -0.55
GPN1-212ENST00000616939 TRBV10-2A0A0K0K1G8 114 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 DEFB1P60022 68 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 TRPT1Q86TN4 253 aaKnown RBP11.6□□□□□ -0.55
GPN1-212ENST00000616939 MUSTN1Q8IVN3 82 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 ABCA4P78363 2273 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
GPN1-212ENST00000616939 F6UB75 175 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 SNCGO76070 127 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 TRBV12-3P01733 135 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 GAGE2BQ13066 116 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 Q8N1Y9 231 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 WDFY4Q6ZS81 3184 aa11.6□□□□□ -0.55
GPN1-212ENST00000616939 F5H697 171 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 M0QY20 66 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 CCL21O00585 134 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 TGFAP01135 160 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 NHLRC4P0CG21 123 aaPredicted RBP11.59□□□□□ -0.55
GPN1-212ENST00000616939 ID1P41134 155 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 LMO4P61968 165 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 JPT2Q9H910 190 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 ZFHX4Q86UP3 3567 aa11.59□□□□□ -0.55
GPN1-212ENST00000616939 BDP1A6H8Y1 2624 aa11.58□□□□□ -0.55
GPN1-212ENST00000616939 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 IGHV3-16A0A0C4DH30 117 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 GATA3P23771 443 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
GPN1-212ENST00000616939 RAX2Q96IS3 184 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 RHPN1-AS1Q9BWJ2 59 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 ACACAQ13085 2346 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 A0A087WWL8 130 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 K7EMT4 169 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 K7ENP7 123 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
GPN1-212ENST00000616939 CFAP47Q6ZTR5 3102 aa11.58□□□□□ -0.56
GPN1-212ENST00000616939 A0A0J9YXY3 114 aa11.57□□□□□ -0.56
GPN1-212ENST00000616939 H3BT86 120 aa11.57□□□□□ -0.56
GPN1-212ENST00000616939 NDUFV3P56181 108 aaKnown RBP11.57□□□□□ -0.56
GPN1-212ENST00000616939 SPANXDQ9BXN6 97 aa11.57□□□□□ -0.56
GPN1-212ENST00000616939 SPANXCQ9NY87 97 aa11.57□□□□□ -0.56
GPN1-212ENST00000616939 SMG1Q96Q15 3661 aaKnown RBP11.57□□□□□ -0.56
GPN1-212ENST00000616939 MAP1BP46821 2468 aaKnown RBP11.56□□□□□ -0.56
GPN1-212ENST00000616939 TRAV8-4A0A0B4J246 113 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 IGLV4-3A0A075B6K6 122 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 H3BMM0 161 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 I3L3M4 83 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 IGHG2P01859 326 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 LITAFQ99732 161 aa11.56□□□□□ -0.56
GPN1-212ENST00000616939 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
GPN1-212ENST00000616939 PIEZO2Q9H5I5 2752 aa11.55□□□□□ -0.56
GPN1-212ENST00000616939 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
GPN1-212ENST00000616939 TCF15Q12870 199 aa11.55□□□□□ -0.56
GPN1-212ENST00000616939 CDSNQ15517 529 aa11.55□□□□□ -0.56
GPN1-212ENST00000616939 Q1RN00 199 aa11.55□□□□□ -0.56
GPN1-212ENST00000616939 ZNF56Q15929 161 aa11.54□□□□□ -0.56
GPN1-212ENST00000616939 DEFB121Q5J5C9 76 aa11.54□□□□□ -0.56
GPN1-212ENST00000616939 FAM240AA0A1B0GVK7 77 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 TRIAP1O43715 76 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 IFITM1P13164 125 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 DCANP1Q8TF63 244 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 LINC00527Q9UJ94 153 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 EP300Q09472 2414 aaPredicted RBP11.53□□□□□ -0.56
GPN1-212ENST00000616939 TRAV4A0A0B4J268 109 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 A0A0J9YXV3 536 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 MRPS36P82909 103 aaKnown RBP11.53□□□□□ -0.56
GPN1-212ENST00000616939 RNF152Q8N8N0 203 aa11.53□□□□□ -0.56
GPN1-212ENST00000616939 KALRNO60229 2985 aa11.52□□□□□ -0.56
GPN1-212ENST00000616939 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 GAGE12JA6NER3 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 GAGE7O76087 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 ELANEP08246 267 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 GAGE12FP0CL80 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 GAGE12GP0CL81 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 GAGE12IP0CL82 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 GAGE4Q13068 117 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 TTC32Q5I0X7 151 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 OPRPNQ99935 248 aaPredicted RBP11.52□□□□□ -0.57
GPN1-212ENST00000616939 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
GPN1-212ENST00000616939 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms