RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
SEMA3B-212ENST00000616701 A0A087WW49 117 aa11.76□□□□□ -0.53
SEMA3B-212ENST00000616701 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
SEMA3B-212ENST00000616701 FHL3Q13643 280 aa11.76□□□□□ -0.53
SEMA3B-212ENST00000616701 Q6AWC8 147 aa11.76□□□□□ -0.53
SEMA3B-212ENST00000616701 C9orf47Q6ZRZ4 202 aa11.76□□□□□ -0.53
SEMA3B-212ENST00000616701 LOC389332A0A1B0GUA5 103 aa11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 DUX3Q96PT4 197 aa11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 SETD2Q9BYW2 2564 aaPredicted RBP11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 D6R8Y8 96 aa11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 F8W1H4 67 aa11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 IGLC6P0CF74 106 aa11.75□□□□□ -0.53
SEMA3B-212ENST00000616701 MTORP42345 2549 aa11.74□□□□□ -0.53
SEMA3B-212ENST00000616701 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
SEMA3B-212ENST00000616701 NCR2O95944 276 aa11.74□□□□□ -0.53
SEMA3B-212ENST00000616701 MRPL23Q16540 153 aaKnown RBP11.74□□□□□ -0.53
SEMA3B-212ENST00000616701 KHDC1LQ5JSQ8 128 aa11.74□□□□□ -0.53
SEMA3B-212ENST00000616701 OR10J6PQ8NGY7 276 aa11.74□□□□□ -0.53
SEMA3B-212ENST00000616701 PTH2Q96A98 100 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 PRELID3AQ96N28 172 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 GAGE13Q4V321 117 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 MRPL51Q4U2R6 128 aaKnown RBP11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 ZNF580Q9UK33 172 aa11.73□□□□□ -0.53
SEMA3B-212ENST00000616701 FASNP49327 2511 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 FAM104BQ5XKR9 115 aa11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 CHCHD1Q96BP2 118 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 LGALS1P09382 135 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 HOXD3P31249 432 aaPredicted RBP11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 FXYD7P58549 80 aa11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 GCN1Q92616 2671 aaKnown RBP11.72□□□□□ -0.53
SEMA3B-212ENST00000616701 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
SEMA3B-212ENST00000616701 ZNF688P0C7X2 276 aa11.71□□□□□ -0.53
SEMA3B-212ENST00000616701 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
SEMA3B-212ENST00000616701 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.53
SEMA3B-212ENST00000616701 C11orf44Q8N8P7 122 aa11.71□□□□□ -0.53
SEMA3B-212ENST00000616701 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.53
SEMA3B-212ENST00000616701 LOC107984640A0A0U1RRK4 108 aa11.71□□□□□ -0.54
SEMA3B-212ENST00000616701 FXYD2P54710 66 aa11.71□□□□□ -0.54
SEMA3B-212ENST00000616701 SLURP1P55000 103 aa11.71□□□□□ -0.54
SEMA3B-212ENST00000616701 ZNF493Q6ZR52 646 aa11.71□□□□□ -0.54
SEMA3B-212ENST00000616701 ZFAND2AQ8N6M9 145 aa11.71□□□□□ -0.54
SEMA3B-212ENST00000616701 AGRNO00468 2067 aa11.71□□□□□ -0.54
SEMA3B-212ENST00000616701 OVOL1O14753 267 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 ELANEP08246 267 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 NMUP48645 174 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 H3BVH4 76 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 K7EMT4 169 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 IFI27P40305 119 aaPredicted RBP11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 FOXI1Q12951 378 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 MEIG1Q5JSS6 88 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 NOTCH2Q04721 2471 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 DCANP1Q8TF63 244 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 LINC00477Q96M19 166 aa11.7□□□□□ -0.54
SEMA3B-212ENST00000616701 PSMG4Q5JS54 123 aa11.69□□□□□ -0.54
SEMA3B-212ENST00000616701 CKS2P33552 79 aa11.69□□□□□ -0.54
SEMA3B-212ENST00000616701 WNK1Q9H4A3 2382 aa11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 TMEM89A2RUT3 159 aa11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 GATA1P15976 413 aaPredicted RBP11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 UBE2E2Q96LR5 201 aa11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 NPYP01303 97 aa11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 EVI2AP22794 236 aa11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 PCP2Q8IVA1 136 aa11.68□□□□□ -0.54
SEMA3B-212ENST00000616701 OR5AL1P0C617 328 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 FGF6P10767 208 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 TTC32Q5I0X7 151 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 ORMDL3Q8N138 153 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 NDUFV3P56181 108 aaKnown RBP11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 LINC01545Q5VT33 79 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 MYOZ3Q8TDC0 251 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 RNF185Q96GF1 192 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 SMIM9A6NGZ8 99 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 SIGLEC8Q9NYZ4 499 aa11.67□□□□□ -0.54
SEMA3B-212ENST00000616701 GNRH2O43555 120 aa11.66□□□□□ -0.54
SEMA3B-212ENST00000616701 NFE4Q86UQ8 179 aa11.66□□□□□ -0.54
SEMA3B-212ENST00000616701 AP5S1Q9NUS5 200 aa11.66□□□□□ -0.54
SEMA3B-212ENST00000616701 SPANXN1Q5VSR9 72 aa11.66□□□□□ -0.54
SEMA3B-212ENST00000616701 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
SEMA3B-212ENST00000616701 Q6ZSV7 163 aa11.66□□□□□ -0.54
SEMA3B-212ENST00000616701 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.54
SEMA3B-212ENST00000616701 KRTAP1-1Q07627 177 aa11.65□□□□□ -0.54
SEMA3B-212ENST00000616701 M0R381 172 aa11.65□□□□□ -0.54
SEMA3B-212ENST00000616701 TTTY13Q9BZ97 58 aa11.65□□□□□ -0.54
SEMA3B-212ENST00000616701 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 A0A1W2PRX2 142 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 S100A4P26447 101 aaKnown RBP11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 CITED2Q99967 270 aaPredicted RBP11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 CNFNQ9BYD5 112 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms