RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
TRAPPC3-209ENST00000616395 GRIFINA4D1Z8 144 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BKO60814 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BJP06899 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BOP23527 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BBP33778 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BDP58876 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BCP62807 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 TWIST1Q15672 202 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST2H2BEQ16778 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BHQ93079 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BNQ99877 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 HIST1H2BMQ99879 126 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 UBR4Q5T4S7 5183 aa12.45□□□□□ -0.42
TRAPPC3-209ENST00000616395 A8MTW9 85 aa12.44□□□□□ -0.42
TRAPPC3-209ENST00000616395 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
TRAPPC3-209ENST00000616395 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
TRAPPC3-209ENST00000616395 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 EPM2AB3EWF7 344 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 INAFM2P0DMQ5 153 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 S100A2P29034 98 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 SPINK13Q1W4C9 94 aa12.43□□□□□ -0.42
TRAPPC3-209ENST00000616395 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 INSP01308 110 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 C1QTNF4Q9BXJ3 329 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
TRAPPC3-209ENST00000616395 FXYD7P58549 80 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 SNRPEP62304 92 aaKnown RBP12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 PRR9Q5T870 116 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 SPATA12Q7Z6I5 190 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
TRAPPC3-209ENST00000616395 IGHV1OR15-1A0A075B7D0 117 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 M0R2Z0 102 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 SNAI2O43623 268 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 NTF3P20783 257 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 AMTNQ6UX39 209 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 ZNF493Q6ZR52 646 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 BAGE3Q86Y29 109 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 SSBP4Q9BWG4 385 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 NACAE9PAV3 2078 aa12.4□□□□□ -0.42
TRAPPC3-209ENST00000616395 C5orf52A6NGY3 159 aa12.39□□□□□ -0.43
TRAPPC3-209ENST00000616395 TMEM256Q8N2U0 113 aa12.39□□□□□ -0.43
TRAPPC3-209ENST00000616395 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
TRAPPC3-209ENST00000616395 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
TRAPPC3-209ENST00000616395 H3BVH4 76 aa12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 PHOX2AO14813 284 aa12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 Q0VG73 95 aa12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
TRAPPC3-209ENST00000616395 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 CBY3A6NI87 242 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 PPBPP02775 128 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 HOXA5P20719 270 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 SRIP30626 198 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 EMP1P54849 157 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 COA6Q5JTJ3 125 aaKnown RBP12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 HTN3P15516 51 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 SLAQ13239 276 aa12.37□□□□□ -0.43
TRAPPC3-209ENST00000616395 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 SSTP61278 116 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 KIAA1644Q3SXP7 199 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 DMRTA1Q5VZB9 504 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 FAM104BQ5XKR9 115 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 AP1S3Q96PC3 154 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 LINC01587Q99440 93 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 LINC00467Q9BRT7 94 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 GOLT1BQ9Y3E0 138 aa12.36□□□□□ -0.43
TRAPPC3-209ENST00000616395 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
TRAPPC3-209ENST00000616395 ORMDL3Q8N138 153 aa12.35□□□□□ -0.43
TRAPPC3-209ENST00000616395 TMEM18Q96B42 140 aa12.35□□□□□ -0.43
TRAPPC3-209ENST00000616395 LAMTOR2Q9Y2Q5 125 aa12.35□□□□□ -0.43
TRAPPC3-209ENST00000616395 MYCBP2O75592 4640 aa12.35□□□□□ -0.43
TRAPPC3-209ENST00000616395 M0R381 172 aa12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 GNRH2O43555 120 aa12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 CKS2P33552 79 aa12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 AKR1D1P51857 326 aa12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 OR10AG1Q8NH19 301 aa12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC3-209ENST00000616395 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
TRAPPC3-209ENST00000616395 KIR3DS1Q14943 382 aa12.33□□□□□ -0.44
TRAPPC3-209ENST00000616395 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms