RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	IGLV2-18	A0A075B6J9	118 aa		11.94	□□□□□ -0.5
SYNRG-223	ENST00000616179	CIRBP	Q14011	172 aa	Known RBP	11.94	□□□□□ -0.5
SYNRG-223	ENST00000616179	TRBV10-2	A0A0K0K1G8	114 aa		11.93	□□□□□ -0.5
SYNRG-223	ENST00000616179	C8orf31	Q8N9H6	132 aa		11.93	□□□□□ -0.5
SYNRG-223	ENST00000616179		M0QXV9	152 aa		11.93	□□□□□ -0.5
SYNRG-223	ENST00000616179	UBE2E1	P51965	193 aa		11.93	□□□□□ -0.5
SYNRG-223	ENST00000616179	WNK1	Q9H4A3	2382 aa		11.92	□□□□□ -0.5
SYNRG-223	ENST00000616179	TRAV41	A0A0B4J266	112 aa		11.92	□□□□□ -0.5
SYNRG-223	ENST00000616179	NDUFA12	Q9UI09	145 aa		11.92	□□□□□ -0.5
SYNRG-223	ENST00000616179	TSPEAR-AS2	P59090	65 aa		11.92	□□□□□ -0.5
SYNRG-223	ENST00000616179	PPDPF	Q9H3Y8	114 aa		11.92	□□□□□ -0.5
SYNRG-223	ENST00000616179	IGHV7-4-1	A0A0J9YVY3	117 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	TRIAP1	O43715	76 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	TMEM141	Q96I45	108 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	TRAV12-2	A0A075B6T6	113 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	ICOS	Q9Y6W8	199 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	RNASE1	P07998	156 aa	Known RBP	11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	BOD1L1	Q8NFC6	3051 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	IGKV3OR2-268	A0A0C4DH90	116 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	C9orf139	Q6ZV77	190 aa		11.91	□□□□□ -0.5
SYNRG-223	ENST00000616179	TLN1	Q9Y490	2541 aa	Known RBP	11.9	□□□□□ -0.5
SYNRG-223	ENST00000616179	KNCN	A6PVL3	124 aa		11.9	□□□□□ -0.5
SYNRG-223	ENST00000616179	FAM110A	Q9BQ89	295 aa		11.9	□□□□□ -0.5
SYNRG-223	ENST00000616179	SUMO4	Q6EEV6	95 aa		11.9	□□□□□ -0.5
SYNRG-223	ENST00000616179		Q6ZSV7	163 aa		11.9	□□□□□ -0.5
SYNRG-223	ENST00000616179	TNFRSF18	Q9Y5U5	241 aa		11.9	□□□□□ -0.5
SYNRG-223	ENST00000616179		Q6ZS92	163 aa		11.9	□□□□□ -0.51
SYNRG-223	ENST00000616179	TRAV13-1	A0A0B4J241	112 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	OVOL3	O00110	214 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	PRR9	Q5T870	116 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	OVOL1	O14753	267 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	KAAG1	Q9UBP8	84 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	KLK9	Q9UKQ9	250 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	DNAL4	O96015	105 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	CNFN	Q9BYD5	112 aa		11.89	□□□□□ -0.51
SYNRG-223	ENST00000616179	NHLRC4	P0CG21	123 aa	Predicted RBP	11.88	□□□□□ -0.51
SYNRG-223	ENST00000616179	OOSP1	A8MZH6	123 aa		11.88	□□□□□ -0.51
SYNRG-223	ENST00000616179	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	LGALS9	O00182	355 aa		11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	LEPROT	O15243	131 aa		11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	LINC00694	P0DN24	101 aa		11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	ZNF22	P17026	224 aa	Predicted RBP	11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	ZNRF2	Q8NHG8	242 aa		11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	IGHV7-81	A0A0B4J1V7	117 aa		11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.87	□□□□□ -0.51
SYNRG-223	ENST00000616179	CDX4	O14627	284 aa	Predicted RBP	11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	ZNF580	Q9UK33	172 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	KLK5	Q9Y337	293 aa	Predicted RBP	11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	LOC107984640	A0A0U1RRK4	108 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179		A8MZ25	164 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	IGHG4	P01861	327 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	ELANE	P08246	267 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	ZNF883	P0CG24	379 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	HIST1H4A	P62805	103 aa	Known RBP	11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	TMEM126A	Q9H061	195 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	MSRB2	Q9Y3D2	182 aa		11.86	□□□□□ -0.51
SYNRG-223	ENST00000616179	LINC01619	G3V211	115 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	KALRN	O60229	2985 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	THBD	P07204	575 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	ATP5J2	P56134	94 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	KHDC1L	Q5JSQ8	128 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	SPANXA1	Q9NS26	97 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	TOMM7	Q9P0U1	55 aa		11.85	□□□□□ -0.51
SYNRG-223	ENST00000616179	IGHV1-69D	A0A0B4J2H0	117 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	IGHV3-38	A0A0C4DH36	116 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179		M0R1W7	72 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	HOXD3	P31249	432 aa	Predicted RBP	11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	SRSF2	Q01130	221 aa	Known RBP	11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	PRR30	Q53SZ7	412 aa	Predicted RBP	11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	LY6G5B	Q8NDX9	201 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	OR13C6P	Q8NH95	151 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	CFAP47	Q6ZTR5	3102 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	RHPN1-AS1	Q9BWJ2	59 aa		11.84	□□□□□ -0.51
SYNRG-223	ENST00000616179	TACC2	O95359	2948 aa		11.83	□□□□□ -0.51
SYNRG-223	ENST00000616179		A0A0J9YXY3	114 aa		11.83	□□□□□ -0.52
SYNRG-223	ENST00000616179	NPFF	O15130	113 aa		11.83	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGHV3OR16-12	A0A075B7B8	117 aa		11.83	□□□□□ -0.52
SYNRG-223	ENST00000616179	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.83	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGHV3-30-3	P0DP02	117 aa		11.83	□□□□□ -0.52
SYNRG-223	ENST00000616179	C9orf47	Q6ZRZ4	202 aa		11.83	□□□□□ -0.52
SYNRG-223	ENST00000616179	CENPVL3	A0A0U1RRI6	287 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	HERVK_113	P63121	156 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	TMEM263	Q8WUH6	116 aa	Known RBP	11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGKV3D-7	A0A0C4DH55	119 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	ODF3	Q96PU9	254 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	SPINK13	Q1W4C9	94 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	C20orf173	Q96LM9	149 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	VPREB3	Q9UKI3	123 aa		11.82	□□□□□ -0.52
SYNRG-223	ENST00000616179	MGA	Q8IWI9	3026 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179	IGLV4-69	A0A075B6H9	119 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179		H7C423	109 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179	SYNJ2BP	P57105	145 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179		F8W735	103 aa	Predicted RBP	11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179	CRYGD	P07320	174 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179		A0A0B4J2C4	111 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179	NPB	Q8NG41	125 aa		11.81	□□□□□ -0.52
SYNRG-223	ENST00000616179	TRBV7-1	A0A0A6YYK4	115 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179	BAALC-AS2	P0C853	105 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179	RHOH	Q15669	191 aa		11.8	□□□□□ -0.52
SYNRG-223	ENST00000616179	COX6B1	P14854	86 aa		11.8	□□□□□ -0.52

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