RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 HIST1H2BAQ96A08 127 aa13.68□□□□□ -0.22
TRAPPC3-208ENST00000616074 J3QL48 77 aa13.67□□□□□ -0.22
TRAPPC3-208ENST00000616074 PLA2G1BP04054 148 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-208ENST00000616074 LINC01620Q4KN68 170 aa13.67□□□□□ -0.22
TRAPPC3-208ENST00000616074 COX8CQ7Z4L0 72 aa13.67□□□□□ -0.22
TRAPPC3-208ENST00000616074 NIT1Q86X76 327 aa13.67□□□□□ -0.22
TRAPPC3-208ENST00000616074 COX11Q9Y6N1 276 aa13.67□□□□□ -0.22
TRAPPC3-208ENST00000616074 A0A087WWL8 130 aa13.66□□□□□ -0.22
TRAPPC3-208ENST00000616074 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
TRAPPC3-208ENST00000616074 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
TRAPPC3-208ENST00000616074 NKX6-2Q9C056 277 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC3-208ENST00000616074 URGCP-MRPS24S4R325 110 aa13.66□□□□□ -0.22
TRAPPC3-208ENST00000616074 RMI2Q96E14 147 aa13.65□□□□□ -0.22
TRAPPC3-208ENST00000616074 KLK12Q9UKR0 248 aa13.65□□□□□ -0.22
TRAPPC3-208ENST00000616074 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
TRAPPC3-208ENST00000616074 PHLDA3Q9Y5J5 127 aa13.65□□□□□ -0.22
TRAPPC3-208ENST00000616074 IGKV2D-24A0A075B6R9 120 aa13.64□□□□□ -0.23
TRAPPC3-208ENST00000616074 TMSB15BA0A087X1C1 80 aa13.64□□□□□ -0.23
TRAPPC3-208ENST00000616074 AKR1C8PQ5T2L2 129 aa13.64□□□□□ -0.23
TRAPPC3-208ENST00000616074 FAM162BQ5T6X4 162 aa13.64□□□□□ -0.23
TRAPPC3-208ENST00000616074 FMC1Q96HJ9 113 aa13.64□□□□□ -0.23
TRAPPC3-208ENST00000616074 LRP1Q07954 4544 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 M0R381 172 aa13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 TPT1P13693 172 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 UBE2G1P62253 170 aa13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 ZNF674Q2M3X9 581 aa13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 LINC01559Q495D7 138 aa13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 SCXQ7RTU7 201 aa13.63□□□□□ -0.23
TRAPPC3-208ENST00000616074 MAP1LC3B2A6NCE7 125 aa13.62□□□□□ -0.23
TRAPPC3-208ENST00000616074 RBFOX3A6NFN3 312 aa13.62□□□□□ -0.23
TRAPPC3-208ENST00000616074 SEC11BP0C7V7 166 aa13.62□□□□□ -0.23
TRAPPC3-208ENST00000616074 Q8N976 141 aa13.62□□□□□ -0.23
TRAPPC3-208ENST00000616074 UBE2WQ96B02 151 aa13.62□□□□□ -0.23
TRAPPC3-208ENST00000616074 MAP1LC3BQ9GZQ8 125 aa13.62□□□□□ -0.23
TRAPPC3-208ENST00000616074 ZFP82Q8N141 532 aa13.61□□□□□ -0.23
TRAPPC3-208ENST00000616074 A0A087WX48 190 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 TRBV10-1A0A0K0K1A3 114 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 TRBV6-1A0A0K0K1D8 114 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 LTAP01374 205 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 UBE2D3P61077 147 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 UBE2D2P62837 147 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 FAT3Q8TDW7 4589 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
TRAPPC3-208ENST00000616074 KRTAP29-1A8MX34 341 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-208ENST00000616074 G3V3Q6 166 aa13.59□□□□□ -0.23
TRAPPC3-208ENST00000616074 RPL36AP83881 106 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-208ENST00000616074 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
TRAPPC3-208ENST00000616074 RPL36ALQ969Q0 106 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-208ENST00000616074 ELOBQ15370 118 aa13.58□□□□□ -0.24
TRAPPC3-208ENST00000616074 CST9LP1Q5W188 147 aa13.58□□□□□ -0.24
TRAPPC3-208ENST00000616074 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
TRAPPC3-208ENST00000616074 CYTL1Q9NRR1 136 aa13.58□□□□□ -0.24
TRAPPC3-208ENST00000616074 TRBV7-3A0A075B6L6 115 aa13.57□□□□□ -0.24
TRAPPC3-208ENST00000616074 AKR1C3P42330 323 aa13.57□□□□□ -0.24
TRAPPC3-208ENST00000616074 FHITP49789 147 aa13.57□□□□□ -0.24
TRAPPC3-208ENST00000616074 KCNIP4Q6PIL6 250 aa13.57□□□□□ -0.24
TRAPPC3-208ENST00000616074 TCEAL7Q9BRU2 100 aa13.57□□□□□ -0.24
TRAPPC3-208ENST00000616074 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
TRAPPC3-208ENST00000616074 OR10G8Q8NGN5 311 aa13.56□□□□□ -0.24
TRAPPC3-208ENST00000616074 BATF3Q9NR55 127 aa13.56□□□□□ -0.24
TRAPPC3-208ENST00000616074 ARPC5O15511 151 aa13.55□□□□□ -0.24
TRAPPC3-208ENST00000616074 KRTAP10-4P60372 401 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-208ENST00000616074 Q0VG73 95 aa13.55□□□□□ -0.24
TRAPPC3-208ENST00000616074 CIRBP-AS1Q8TBR5 109 aa13.55□□□□□ -0.24
TRAPPC3-208ENST00000616074 TMEM262E9PQX1 116 aa13.54□□□□□ -0.24
TRAPPC3-208ENST00000616074 RPL19P84098 196 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-208ENST00000616074 NEXN-AS1Q8NBZ9 246 aa13.54□□□□□ -0.24
TRAPPC3-208ENST00000616074 OR10AG1Q8NH19 301 aa13.54□□□□□ -0.24
TRAPPC3-208ENST00000616074 STOML3Q8TAV4 291 aa13.54□□□□□ -0.24
TRAPPC3-208ENST00000616074 HMCN2Q8NDA2 5059 aa13.54□□□□□ -0.24
TRAPPC3-208ENST00000616074 TRBV6-8A0A0A6YYG3 113 aa13.53□□□□□ -0.24
TRAPPC3-208ENST00000616074 PAGE4O60829 102 aa13.53□□□□□ -0.24
TRAPPC3-208ENST00000616074 ZNF56Q15929 161 aa13.53□□□□□ -0.24
TRAPPC3-208ENST00000616074 ENHOQ6UWT2 76 aa13.53□□□□□ -0.24
TRAPPC3-208ENST00000616074 C1orf43Q9BWL3 253 aa13.53□□□□□ -0.24
TRAPPC3-208ENST00000616074 PKHD1L1Q86WI1 4243 aa13.53□□□□□ -0.24
TRAPPC3-208ENST00000616074 RAB4BP61018 213 aa13.52□□□□□ -0.25
TRAPPC3-208ENST00000616074 MPV17L2Q567V2 206 aa13.52□□□□□ -0.25
TRAPPC3-208ENST00000616074 PRR27Q6MZM9 219 aa13.52□□□□□ -0.25
TRAPPC3-208ENST00000616074 C15orf54Q8N8G6 183 aa13.52□□□□□ -0.25
TRAPPC3-208ENST00000616074 CRPP02741 224 aa13.51□□□□□ -0.25
TRAPPC3-208ENST00000616074 CXCL1P09341 107 aa13.5□□□□□ -0.25
TRAPPC3-208ENST00000616074 C14orf177Q52M58 125 aa13.5□□□□□ -0.25
TRAPPC3-208ENST00000616074 A0A1B0GV50 99 aa13.49□□□□□ -0.25
TRAPPC3-208ENST00000616074 SCO2A0A1W2PP80 73 aa13.49□□□□□ -0.25
TRAPPC3-208ENST00000616074 SNAI2O43623 268 aa13.49□□□□□ -0.25
TRAPPC3-208ENST00000616074 MLST8Q9BVC4 326 aa13.49□□□□□ -0.25
TRAPPC3-208ENST00000616074 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-208ENST00000616074 MUC21A0A0G2JKD1 596 aa13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 MUC21A0A140T8X8 626 aa13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 SMLR1H3BR10 107 aa13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 ANGP03950 147 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 S100A9P06702 114 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 SFT2D1Q8WV19 159 aa13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 CHCHD5Q9BSY4 110 aa13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 SSBP4Q9BWG4 385 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-208ENST00000616074 IGLV2-8P01709 118 aa13.47□□□□□ -0.25
TRAPPC3-208ENST00000616074 HLA-DQA1P01909 254 aa13.47□□□□□ -0.25
TRAPPC3-208ENST00000616074 BAGE2Q86Y30 109 aa13.47□□□□□ -0.25
TRAPPC3-208ENST00000616074 FAM213BQ8TBF2 198 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms