RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 NTN5Q8WTR8 489 aaPredicted RBP9.87□□□□□ -0.83
TCF4-248ENST00000616053 LGALS9O00182 355 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 IGFL3Q6UXB1 125 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 FAM231DQ6ZW35 169 aa9.87□□□□□ -0.83
TCF4-248ENST00000616053 PLA2G2AP14555 144 aa9.86□□□□□ -0.83
TCF4-248ENST00000616053 K7EM74 188 aa9.86□□□□□ -0.83
TCF4-248ENST00000616053 Q5BKY6 102 aa9.86□□□□□ -0.83
TCF4-248ENST00000616053 BLCAPP62952 87 aa9.86□□□□□ -0.83
TCF4-248ENST00000616053 CEND1Q8N111 149 aa9.86□□□□□ -0.83
TCF4-248ENST00000616053 C2orf70A6NJV1 201 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 SIVA1O15304 175 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 ZNF833PQ6ZTB9 187 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 CARHSP1Q9Y2V2 147 aaKnown RBP9.85□□□□□ -0.83
TCF4-248ENST00000616053 Q8TCH9 128 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 BCORQ6W2J9 1755 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 NUP210Q8TEM1 1887 aaPredicted RBP9.85□□□□□ -0.83
TCF4-248ENST00000616053 Q6P435 159 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 CFC1BP0CG36 223 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 CFC1P0CG37 223 aa9.85□□□□□ -0.83
TCF4-248ENST00000616053 A0A0B4J2C4 111 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 DLEU1O43261 78 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 PLXNA1Q9UIW2 1896 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 KDM3BQ7LBC6 1761 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 F8W1H4 67 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 UFSP1Q6NVU6 142 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 TECTAO75443 2155 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BKO60814 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BJP06899 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BOP23527 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BBP33778 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BDP58876 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BCP62807 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST2H2BEQ16778 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BHQ93079 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BNQ99877 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 HIST1H2BMQ99879 126 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 SIRPDQ9H106 197 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 MPZP25189 248 aa9.84□□□□□ -0.83
TCF4-248ENST00000616053 PDE6GP18545 87 aa9.83□□□□□ -0.84
TCF4-248ENST00000616053 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
TCF4-248ENST00000616053 FAM231BA6NCW3 169 aa9.83□□□□□ -0.84
TCF4-248ENST00000616053 LY6G6FQ5SQ64 297 aa9.83□□□□□ -0.84
TCF4-248ENST00000616053 WFDC1Q9HC57 220 aa9.83□□□□□ -0.84
TCF4-248ENST00000616053 COL11A1P12107 1806 aaPredicted RBP9.83□□□□□ -0.84
TCF4-248ENST00000616053 REG3AQ06141 175 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 DAND5Q8N907 189 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 NOTCH2Q04721 2471 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 NHSQ6T4R5 1651 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 LY6LH3BQJ8 138 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 VWCEQ96DN2 955 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 ATOX1O00244 68 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 GRNP28799 593 aaKnown RBP9.82□□□□□ -0.84
TCF4-248ENST00000616053 DLEC1Q9Y238 1755 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 PARP14Q460N5 1801 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 TMEM14EPQ6UXP3 125 aa9.82□□□□□ -0.84
TCF4-248ENST00000616053 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 C10orf105Q8TEF2 133 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 PLXNB3Q9ULL4 1909 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 J3QRE1 110 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 IGLV2-8P01709 118 aa9.81□□□□□ -0.84
TCF4-248ENST00000616053 SLPIP03973 132 aa9.8□□□□□ -0.84
TCF4-248ENST00000616053 TPSG1Q9NRR2 321 aa9.8□□□□□ -0.84
TCF4-248ENST00000616053 C16orf54Q6UWD8 224 aa9.8□□□□□ -0.84
TCF4-248ENST00000616053 WI2-2373I1.2A0A1W2PRP0 233 aa9.8□□□□□ -0.84
TCF4-248ENST00000616053 IGLC2P0DOY2 106 aa9.8□□□□□ -0.84
TCF4-248ENST00000616053 IGLC3P0DOY3 106 aa9.8□□□□□ -0.84
TCF4-248ENST00000616053 RBBP6Q7Z6E9 1792 aaKnown RBP9.79□□□□□ -0.84
TCF4-248ENST00000616053 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 NPYP01303 97 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 TMEM14CQ9P0S9 112 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 K7ERJ3 54 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 PLXNA3P51805 1871 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 STRCP1A6NGW2 1772 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 STRCQ7RTU9 1775 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 OBSL1O75147 1896 aa9.79□□□□□ -0.84
TCF4-248ENST00000616053 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 OTOGLQ3ZCN5 2332 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 A6NED7 52 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 C9orf118A6NHY6 69 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 CTSZQ9UBR2 303 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 J3QL48 77 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 C1orf158Q8N1D5 194 aa9.78□□□□□ -0.84
TCF4-248ENST00000616053 IGLV2-11P01706 119 aa9.77□□□□□ -0.84
TCF4-248ENST00000616053 PTPN13Q12923 2485 aa9.77□□□□□ -0.84
TCF4-248ENST00000616053 K7EMI3 77 aa9.77□□□□□ -0.84
TCF4-248ENST00000616053 CRYGBP07316 175 aa9.77□□□□□ -0.85
TCF4-248ENST00000616053 ZNF843Q8N446 348 aa9.77□□□□□ -0.85
TCF4-248ENST00000616053 QRFPP83859 136 aa9.77□□□□□ -0.85
TCF4-248ENST00000616053 DAZAP2Q15038 168 aaPredicted RBP9.77□□□□□ -0.85
TCF4-248ENST00000616053 SIPA1L1O43166 1804 aa9.77□□□□□ -0.85
TCF4-248ENST00000616053 LINC01545Q5VT33 79 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms