RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
CD48-203ENST00000613788 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.74
CD48-203ENST00000613788 ZNF479Q96JC4 524 aa10.4□□□□□ -0.74
CD48-203ENST00000613788 URGCP-MRPS24S4R325 110 aa10.4□□□□□ -0.74
CD48-203ENST00000613788 A0A087WWL8 130 aa10.39□□□□□ -0.75
CD48-203ENST00000613788 TRAV10A0A0B4J240 114 aa10.39□□□□□ -0.75
CD48-203ENST00000613788 CRYGDP07320 174 aa10.39□□□□□ -0.75
CD48-203ENST00000613788 HTN3P15516 51 aa10.39□□□□□ -0.75
CD48-203ENST00000613788 SLAQ13239 276 aa10.39□□□□□ -0.75
CD48-203ENST00000613788 FAM74A4Q5TZK3 123 aa10.39□□□□□ -0.75
CD48-203ENST00000613788 MRPL54Q6P161 138 aaKnown RBP10.39□□□□□ -0.75
CD48-203ENST00000613788 DEFB131BA0A096LNP1 70 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 TRGV4A0A0C4DH28 118 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 F5H768 121 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 EVI2AP22794 236 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 CAMPP49913 170 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 HBBP68871 147 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 WWC2-AS2Q96NR7 200 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 SAMD10Q9BYL1 202 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 SMCO4Q9NRQ5 59 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 FHL2Q14192 279 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 UFSP1Q6NVU6 142 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
CD48-203ENST00000613788 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 KIF25-AS1Q9Y6Z4 181 aa10.38□□□□□ -0.75
CD48-203ENST00000613788 IGHV3-73A0A0B4J1V6 119 aa10.37□□□□□ -0.75
CD48-203ENST00000613788 A0A1B0GXF2 115 aa10.37□□□□□ -0.75
CD48-203ENST00000613788 RASL11AQ6T310 242 aa10.37□□□□□ -0.75
CD48-203ENST00000613788 HHLA3Q9XRX5 114 aa10.37□□□□□ -0.75
CD48-203ENST00000613788 F5H697 171 aa10.36□□□□□ -0.75
CD48-203ENST00000613788 HOXA5P20719 270 aa10.36□□□□□ -0.75
CD48-203ENST00000613788 RAB4BP61018 213 aa10.36□□□□□ -0.75
CD48-203ENST00000613788 PRO0255Q9UI72 69 aa10.36□□□□□ -0.75
CD48-203ENST00000613788 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
CD48-203ENST00000613788 MGPP08493 103 aa10.35□□□□□ -0.75
CD48-203ENST00000613788 GATA1P15976 413 aaPredicted RBP10.35□□□□□ -0.75
CD48-203ENST00000613788 ELOBQ15370 118 aa10.35□□□□□ -0.75
CD48-203ENST00000613788 ZNF56Q15929 161 aa10.35□□□□□ -0.75
CD48-203ENST00000613788 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
CD48-203ENST00000613788 LINC00315P59091 139 aa10.34□□□□□ -0.75
CD48-203ENST00000613788 COX19Q49B96 90 aa10.34□□□□□ -0.75
CD48-203ENST00000613788 CBLN2Q8IUK8 224 aa10.34□□□□□ -0.75
CD48-203ENST00000613788 TRBV24-1A0A075B6N3 115 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 TRBV6-4A0A1B0GX49 114 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 CRYBA4P53673 196 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 GATD1Q8NB37 220 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 TGP01266 2768 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 PAX4O43316 350 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 CEMP1Q6PRD7 247 aaPredicted RBP10.33□□□□□ -0.76
CD48-203ENST00000613788 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 FRZBQ92765 325 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
CD48-203ENST00000613788 TRAV26-1A0A087WT03 109 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 TGIF2-C20orf24A0A0A6YYL0 155 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 H3BNG1 76 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 H7C1H1 209 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 RAB4AP20338 218 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 RHOHQ15669 191 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 Q6ZSN1 163 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
CD48-203ENST00000613788 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
CD48-203ENST00000613788 A0A0J9YY99 117 aa10.31□□□□□ -0.76
CD48-203ENST00000613788 K7EQD1 137 aa10.31□□□□□ -0.76
CD48-203ENST00000613788 YPEL4Q96NS1 127 aa10.31□□□□□ -0.76
CD48-203ENST00000613788 GNB1LQ9BYB4 327 aa10.31□□□□□ -0.76
CD48-203ENST00000613788 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
CD48-203ENST00000613788 IGLL5B9A064 214 aa10.3□□□□□ -0.76
CD48-203ENST00000613788 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
CD48-203ENST00000613788 MRAP2Q96G30 205 aa10.3□□□□□ -0.76
CD48-203ENST00000613788 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
CD48-203ENST00000613788 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
CD48-203ENST00000613788 M0QY20 66 aa10.29□□□□□ -0.76
CD48-203ENST00000613788 SCO1O75880 301 aa10.29□□□□□ -0.76
CD48-203ENST00000613788 HLA-DQA1P01909 254 aa10.29□□□□□ -0.76
CD48-203ENST00000613788 MT-ND6P03923 174 aa10.29□□□□□ -0.76
CD48-203ENST00000613788 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
CD48-203ENST00000613788 NACAE9PAV3 2078 aa10.29□□□□□ -0.76
CD48-203ENST00000613788 GYPEP15421 78 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
CD48-203ENST00000613788 C15orf53Q8NAA6 179 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 DNAH7Q8WXX0 4024 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 TRAV26-2A0A0B4J265 109 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
CD48-203ENST00000613788 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 DNAJC30Q96LL9 226 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
CD48-203ENST00000613788 PPP1R17O96001 155 aa10.27□□□□□ -0.77
CD48-203ENST00000613788 APCSP02743 223 aa10.27□□□□□ -0.77
CD48-203ENST00000613788 PPBPP02775 128 aa10.27□□□□□ -0.77
CD48-203ENST00000613788 CKS2P33552 79 aa10.27□□□□□ -0.77
CD48-203ENST00000613788 TCTAP57738 103 aa10.27□□□□□ -0.77
CD48-203ENST00000613788 RPL36AP83881 106 aaKnown RBP10.27□□□□□ -0.77
CD48-203ENST00000613788 RPL36ALQ969Q0 106 aaKnown RBP10.27□□□□□ -0.77
CD48-203ENST00000613788 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms