RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 ITLN1Q8WWA0 313 aa4.04□□□□□ -1.76
CCL16-206ENST00000613642 ITLN2Q8WWU7 325 aaPredicted RBP4.04□□□□□ -1.76
CCL16-206ENST00000613642 ICOSQ9Y6W8 199 aa4.04□□□□□ -1.76
CCL16-206ENST00000613642 PHF3Q92576 2039 aaKnown RBP4.04□□□□□ -1.76
CCL16-206ENST00000613642 VCANP13611 3396 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 CEP290O15078 2479 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 A0A1B0GW54 56 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 FAM72CH0Y354 149 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 M0R135 149 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 COX6B1P14854 86 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 SYCNQ0VAF6 134 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 FAM72AQ5TYM5 149 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 FAM72DQ6L9T8 149 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 FAM53AQ6NSI3 398 aaPredicted RBP4.03□□□□□ -1.76
CCL16-206ENST00000613642 IGFL3Q6UXB1 125 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 FOXL2NBQ6ZUU3 175 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 Q8N6K4 173 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 CCL4L1Q8NHW4 92 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 TMEM141Q96I45 108 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 FAM167A-AS1Q96KT0 104 aa4.03□□□□□ -1.76
CCL16-206ENST00000613642 CUL9Q8IWT3 2517 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 LTBP2Q14767 1821 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 SMCHD1A6NHR9 2005 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 IGHV3OR16-10A0A075B7F0 116 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 IGHV1-69DA0A0B4J2H0 117 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 TRGV8A0A0C4DH27 118 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 SMIM22K7EJ46 135 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 SNRNP200O75643 2136 aaKnown RBP4.02□□□□□ -1.77
CCL16-206ENST00000613642 IGHV4-31P0DP07 118 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 EGR2P11161 476 aaPredicted RBP4.02□□□□□ -1.77
CCL16-206ENST00000613642 HMGA1P17096 107 aaKnown RBP4.02□□□□□ -1.77
CCL16-206ENST00000613642 SPINT3P49223 89 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 ZNF137PP52743 207 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 EDDM3BP56851 147 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 Q6ZPA2 131 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 BPESC1Q9GZL8 116 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 EYSQ5T1H1 3165 aa4.02□□□□□ -1.77
CCL16-206ENST00000613642 POLEQ07864 2286 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 IGKV6D-41A0A0C4DH26 115 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 A0A0J9YX75 114 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 TRBV6-1A0A0K0K1D8 114 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 hDV103S1A0JD37 113 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 GNRH2O43555 120 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 FAM229BQ4G0N7 80 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 C11orf71Q6IPW1 123 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 NDUFA12Q9UI09 145 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 THADAQ6YHU6 1953 aa4.01□□□□□ -1.77
CCL16-206ENST00000613642 IGKV3D-7A0A0C4DH55 119 aa4□□□□□ -1.77
CCL16-206ENST00000613642 TRBV5-4A0A0C4DH59 114 aa4□□□□□ -1.77
CCL16-206ENST00000613642 SDHAF1A6NFY7 115 aa4□□□□□ -1.77
CCL16-206ENST00000613642 C11orf86A6NJI1 115 aa4□□□□□ -1.77
CCL16-206ENST00000613642 D6R8Y8 96 aa4□□□□□ -1.77
CCL16-206ENST00000613642 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
CCL16-206ENST00000613642 LMO4P61968 165 aa4□□□□□ -1.77
CCL16-206ENST00000613642 RPS21P63220 83 aaKnown RBP4□□□□□ -1.77
CCL16-206ENST00000613642 NRACQ8N912 160 aa4□□□□□ -1.77
CCL16-206ENST00000613642 RMI2Q96E14 147 aa4□□□□□ -1.77
CCL16-206ENST00000613642 IMMP1LQ96LU5 166 aa4□□□□□ -1.77
CCL16-206ENST00000613642 LIMD2Q9BT23 127 aa4□□□□□ -1.77
CCL16-206ENST00000613642 ZNF706Q9Y5V0 76 aaPredicted RBP4□□□□□ -1.77
CCL16-206ENST00000613642 COL4A6Q14031 1691 aa4□□□□□ -1.77
CCL16-206ENST00000613642 TDRD6O60522 2096 aaKnown RBP3.99□□□□□ -1.77
CCL16-206ENST00000613642 TRAV22A0A0B4J277 110 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 A0A0G2JRQ6 117 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 C3orf84H3BNL1 204 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 H3BSH0 61 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 ZNHIT1O43257 154 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 PPP1R17O96001 155 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 IGKV1-16P04430 117 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 Q6ZRP5 223 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 C2orf16Q68DN1 1984 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 PRUNE2Q8WUY3 3088 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 COL4A1P02462 1669 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 MUC3AQ02505 3323 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 SPTBN5Q9NRC6 3674 aaKnown RBP3.99□□□□□ -1.77
CCL16-206ENST00000613642 PCNX3Q9H6A9 2034 aa3.99□□□□□ -1.77
CCL16-206ENST00000613642 EML6Q6ZMW3 1958 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 COL4A4P53420 1690 aaPredicted RBP3.98□□□□□ -1.77
CCL16-206ENST00000613642 TRAV23DV6A0A075B6W5 121 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 A0A087WVE0 104 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 C16orf90A8MZG2 172 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 NDUFA3O95167 84 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 RPL28P46779 137 aaKnown RBP3.98□□□□□ -1.77
CCL16-206ENST00000613642 MIR17HGQ75NE6 70 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 PRSS33Q8NF86 280 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
CCL16-206ENST00000613642 SCGB3A1Q96QR1 104 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 ZNF702PQ9H963 129 aa3.98□□□□□ -1.77
CCL16-206ENST00000613642 LAMA2P24043 3122 aaKnown RBP3.98□□□□□ -1.77
CCL16-206ENST00000613642 IGKV1-27A0A075B6S5 117 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 IGHV5-51A0A0C4DH38 117 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 IGKV1-8A0A0C4DH67 115 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 TRBV7-4A0A0J9YYF1 115 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 CDK2AP2O75956 126 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 IGHV3-13P01766 116 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 CD24P25063 80 aa3.97□□□□□ -1.77
CCL16-206ENST00000613642 C18orf65Q6ZTR6 163 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms