RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 WFDC2Q14508 124 aa13.46□□□□□ -0.26
HMGXB3-206ENST00000613459 DKK4Q9UBT3 224 aa13.46□□□□□ -0.26
HMGXB3-206ENST00000613459 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 LGALS9O00182 355 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 NDUFA1O15239 70 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 HIST2H2BCQ6DN03 193 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 SLURP1P55000 103 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 TIRAPP58753 221 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 CHD3Q12873 2000 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 MYCNOSP40205 109 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 RPL18AQ02543 176 aaKnown RBP13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 NREPQ16612 68 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 GTSF1Q8WW33 167 aa13.45□□□□□ -0.26
HMGXB3-206ENST00000613459 TEX22C9J3V5 150 aa13.44□□□□□ -0.26
HMGXB3-206ENST00000613459 PDE6GP18545 87 aa13.44□□□□□ -0.26
HMGXB3-206ENST00000613459 CACNA1GO43497 2377 aa13.44□□□□□ -0.26
HMGXB3-206ENST00000613459 NBASA2RRP1 2371 aa13.43□□□□□ -0.26
HMGXB3-206ENST00000613459 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
HMGXB3-206ENST00000613459 DOCK7Q96N67 2140 aa13.43□□□□□ -0.26
HMGXB3-206ENST00000613459 CADP27708 2225 aa13.43□□□□□ -0.26
HMGXB3-206ENST00000613459 C2orf70A6NJV1 201 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 APRG1Q8IVJ8 170 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 TM2D2Q9BX73 214 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 IGLV1-47P01700 117 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 PLXND1Q9Y4D7 1925 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 IGHV4-38-2P0DP08 117 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 NUP210Q8TEM1 1887 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 MSRB1Q9NZV6 116 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 TRAV26-1A0A087WT03 109 aa13.42□□□□□ -0.26
HMGXB3-206ENST00000613459 IGHV4-4A0A075B6R2 117 aa13.41□□□□□ -0.26
HMGXB3-206ENST00000613459 C4orf3Q8WVX3 66 aa13.41□□□□□ -0.26
HMGXB3-206ENST00000613459 YPEL4Q96NS1 127 aa13.41□□□□□ -0.26
HMGXB3-206ENST00000613459 SPATA25Q9BR10 227 aa13.41□□□□□ -0.26
HMGXB3-206ENST00000613459 Q8N1Y9 231 aa13.41□□□□□ -0.26
HMGXB3-206ENST00000613459 TRBV10-1A0A0K0K1A3 114 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 FRMPD3Q5JV73 1810 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 CACNA1HO95180 2353 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 SPRNQ5BIV9 151 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 DEFB136Q30KP8 78 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 ABCA4P78363 2273 aa13.4□□□□□ -0.26
HMGXB3-206ENST00000613459 SPTAN1Q13813 2472 aaKnown RBP13.39□□□□□ -0.27
HMGXB3-206ENST00000613459 NOTCH4Q99466 2003 aa13.39□□□□□ -0.27
HMGXB3-206ENST00000613459 ODF1Q14990 250 aa13.39□□□□□ -0.27
HMGXB3-206ENST00000613459 Q9HAA7 133 aa13.39□□□□□ -0.27
HMGXB3-206ENST00000613459 IGHV4OR15-8A0A075B7B6 117 aa13.39□□□□□ -0.27
HMGXB3-206ENST00000613459 A0A087WW49 117 aa13.39□□□□□ -0.27
HMGXB3-206ENST00000613459 IGHV1-58A0A0C4DH39 117 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 SPRY2O43597 315 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 RITA1Q96K30 269 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 TMEM256-PLSCR3K7ERE1 68 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 CRYGBP07316 175 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 KMT2EQ8IZD2 1858 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 IGHV4-28A0A0C4DH34 117 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 C19orf71A6NCJ1 209 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 GRNP28799 593 aaKnown RBP13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 INSL3P51460 131 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 HHLA3Q9XRX5 114 aa13.38□□□□□ -0.27
HMGXB3-206ENST00000613459 NCR3O14931 201 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 BLCAPP62952 87 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 SPATA12Q7Z6I5 190 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 ODF3L1Q8IXM7 274 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 DIRC1Q969H9 104 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 ARFGEF3Q5TH69 2177 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 LECT2O14960 151 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 CLEC2BQ92478 149 aa13.37□□□□□ -0.27
HMGXB3-206ENST00000613459 C11orf1Q9H5F2 150 aa13.36□□□□□ -0.27
HMGXB3-206ENST00000613459 LINC00643Q86TS7 51 aa13.36□□□□□ -0.27
HMGXB3-206ENST00000613459 C20orf203Q8NBC4 194 aa13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 PRAC2D3DTV9 90 aa13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 TMEM263Q8WUH6 116 aaKnown RBP13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 SIRPDQ9H106 197 aa13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 DOCK9Q9BZ29 2069 aa13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 CLPSL1A2RUU4 121 aa13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
HMGXB3-206ENST00000613459 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 WT1P19544 449 aaPredicted RBP13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 PRB1P04280 392 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 Q8N7P7 452 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 DAND5Q8N907 189 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 IGLV2-14P01704 120 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 FRMD6-AS1P0C7T7 363 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 HIGD2BQ4VC39 106 aa13.34□□□□□ -0.27
HMGXB3-206ENST00000613459 A0A0J9YX75 114 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 PROP1O75360 226 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 IGHV3-30P01768 117 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 IGHV3-33P01772 117 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 IGHV3-30-3P0DP02 117 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 ADORA2A-AS1P86434 159 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 SPAG11BQ08648 103 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 LINC00574Q9H8X3 128 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 TTTY13Q9BZ97 58 aa13.33□□□□□ -0.28
HMGXB3-206ENST00000613459 DOCK10Q96BY6 2186 aa13.32□□□□□ -0.28
HMGXB3-206ENST00000613459 IGLV10-54A0A075B6I4 117 aa13.31□□□□□ -0.28
HMGXB3-206ENST00000613459 A6NDX4 124 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1634 ms