RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
SREK1-216ENST00000612404 A8MWV9 139 aa12.55□□□□□ -0.4
SREK1-216ENST00000612404 RAB4AP20338 218 aa12.55□□□□□ -0.4
SREK1-216ENST00000612404 RNF185Q96GF1 192 aa12.55□□□□□ -0.4
SREK1-216ENST00000612404 SPATA25Q9BR10 227 aa12.55□□□□□ -0.4
SREK1-216ENST00000612404 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
SREK1-216ENST00000612404 IGHV3-73A0A0B4J1V6 119 aa12.54□□□□□ -0.4
SREK1-216ENST00000612404 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
SREK1-216ENST00000612404 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
SREK1-216ENST00000612404 KIF25-AS1Q9Y6Z4 181 aa12.54□□□□□ -0.4
SREK1-216ENST00000612404 PHOX2AO14813 284 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 CRYGDP07320 174 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 FAM222AQ5U5X8 452 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 F5H697 171 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
SREK1-216ENST00000612404 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.4
SREK1-216ENST00000612404 CKS2P33552 79 aa12.52□□□□□ -0.4
SREK1-216ENST00000612404 DEFA6Q01524 100 aa12.52□□□□□ -0.4
SREK1-216ENST00000612404 ZNF56Q15929 161 aa12.52□□□□□ -0.4
SREK1-216ENST00000612404 OR4C5Q8NGB2 326 aa12.52□□□□□ -0.4
SREK1-216ENST00000612404 LYRM9A8MSI8 78 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 D6R8Y8 96 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 SMKR1H3BMG3 65 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 RS1O15537 224 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 NCR2O95944 276 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 RAB5BP61020 215 aa12.52□□□□□ -0.41
SREK1-216ENST00000612404 SRIP30626 198 aa12.51□□□□□ -0.41
SREK1-216ENST00000612404 LINC00315P59091 139 aa12.51□□□□□ -0.41
SREK1-216ENST00000612404 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
SREK1-216ENST00000612404 DKK2Q9UBU2 259 aa12.51□□□□□ -0.41
SREK1-216ENST00000612404 NACAE9PAV3 2078 aa12.51□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BKO60814 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BJP06899 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BOP23527 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BBP33778 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BDP58876 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BCP62807 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST2H2BEQ16778 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.5□□□□□ -0.41
SREK1-216ENST00000612404 ORMDL3Q8N138 153 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BHQ93079 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 ZNF479Q96JC4 524 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BNQ99877 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 HIST1H2BMQ99879 126 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 ZMAT4Q9H898 229 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 CELA1Q9UNI1 258 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 COL7A1Q02388 2944 aa12.5□□□□□ -0.41
SREK1-216ENST00000612404 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 ALKBH7Q9BT30 221 aaPredicted RBP12.49□□□□□ -0.41
SREK1-216ENST00000612404 RHODO00212 210 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 SPART-AS1P0CW21 52 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 PRELID3AQ96N28 172 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
SREK1-216ENST00000612404 GATA1P15976 413 aaPredicted RBP12.48□□□□□ -0.41
SREK1-216ENST00000612404 U3KQK5 164 aa12.48□□□□□ -0.41
SREK1-216ENST00000612404 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
SREK1-216ENST00000612404 LOC105371267A0A1B0GV96 52 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 PPBPP02775 128 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 DAD1P61803 113 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 ZFP2Q6ZN57 461 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 C11orf68Q9H3H3 251 aaKnown RBP12.47□□□□□ -0.41
SREK1-216ENST00000612404 A0A0J9YWU9 116 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 DNAH9Q9NYC9 4486 aa12.47□□□□□ -0.41
SREK1-216ENST00000612404 PRKDCP78527 4128 aaKnown RBP12.47□□□□□ -0.41
SREK1-216ENST00000612404 Q6ZSN1 163 aa12.46□□□□□ -0.42
SREK1-216ENST00000612404 NPYP01303 97 aa12.45□□□□□ -0.42
SREK1-216ENST00000612404 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
SREK1-216ENST00000612404 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 M0QY20 66 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 TNFRSF6BO95407 300 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 C18orf32Q8TCD1 76 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
SREK1-216ENST00000612404 NRACQ8N912 160 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 LOC389332A0A1B0GUA5 103 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 H7C1H1 209 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 NDUFA6P56556 154 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 BAGE3Q86Y29 109 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 LAMTOR2Q9Y2Q5 125 aa12.43□□□□□ -0.42
SREK1-216ENST00000612404 CIDEAO60543 219 aa12.42□□□□□ -0.42
SREK1-216ENST00000612404 P0DMU3 169 aa12.42□□□□□ -0.42
SREK1-216ENST00000612404 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
SREK1-216ENST00000612404 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
SREK1-216ENST00000612404 S100A6P06703 90 aa12.41□□□□□ -0.42
SREK1-216ENST00000612404 STAB2Q8WWQ8 2551 aa12.41□□□□□ -0.42
SREK1-216ENST00000612404 PPP1R17O96001 155 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms