RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CRYGDP07320 174 aa8.44□□□□□ -1.06
CBWD3-208ENST00000612050 TNP2Q05952 138 aa8.44□□□□□ -1.06
CBWD3-208ENST00000612050 LELP1Q5T871 98 aa8.44□□□□□ -1.06
CBWD3-208ENST00000612050 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
CBWD3-208ENST00000612050 SFRP2Q96HF1 295 aa8.44□□□□□ -1.06
CBWD3-208ENST00000612050 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 P01737 135 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
CBWD3-208ENST00000612050 GAGE1Q13065 139 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 GAGE4Q13068 117 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 GAGE5Q13069 117 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 ZNF56Q15929 161 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 GAGE13Q4V321 117 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 KCNIP4Q6PIL6 250 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
CBWD3-208ENST00000612050 SCRT2Q9NQ03 307 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 URGCP-MRPS24S4R325 110 aa8.43□□□□□ -1.06
CBWD3-208ENST00000612050 A0A087WWL8 130 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 TRBV10-1A0A0K0K1A3 114 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 PSCAO43653 123 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 OR5AL1P0C617 328 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 RPL19P84098 196 aaKnown RBP8.42□□□□□ -1.06
CBWD3-208ENST00000612050 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 TPPP3Q9BW30 176 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
CBWD3-208ENST00000612050 F5H697 171 aa8.41□□□□□ -1.06
CBWD3-208ENST00000612050 OR2D3Q8NGH3 330 aa8.41□□□□□ -1.06
CBWD3-208ENST00000612050 AP1S3Q96PC3 154 aa8.41□□□□□ -1.06
CBWD3-208ENST00000612050 JPT2Q9H910 190 aa8.41□□□□□ -1.06
CBWD3-208ENST00000612050 SNAI2O43623 268 aa8.4□□□□□ -1.06
CBWD3-208ENST00000612050 RAB4BP61018 213 aa8.4□□□□□ -1.06
CBWD3-208ENST00000612050 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.06
CBWD3-208ENST00000612050 TOR2AQ5JU69 321 aa8.4□□□□□ -1.06
CBWD3-208ENST00000612050 FER1L6-AS1Q8NA97 138 aa8.4□□□□□ -1.06
CBWD3-208ENST00000612050 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.06
CBWD3-208ENST00000612050 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 F2Z2F3 143 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 SSTP61278 116 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 CACNG7P62955 275 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 OR10AG1Q8NH19 301 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 EIF5A2Q9GZV4 153 aaKnown RBP8.39□□□□□ -1.07
CBWD3-208ENST00000612050 BIRC6Q9NR09 4857 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
CBWD3-208ENST00000612050 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
CBWD3-208ENST00000612050 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
CBWD3-208ENST00000612050 H7C1H1 209 aa8.38□□□□□ -1.07
CBWD3-208ENST00000612050 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-208ENST00000612050 UFSP1Q6NVU6 142 aa8.38□□□□□ -1.07
CBWD3-208ENST00000612050 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
CBWD3-208ENST00000612050 C14orf178Q8N769 122 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-208ENST00000612050 SSBP4Q9BWG4 385 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-208ENST00000612050 IGHV3-30P01768 117 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 IGHV3-33P01772 117 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 IGHV3-30-3P0DP02 117 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 IGHV3-30-5P0DP03 117 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 CEBPGP53567 150 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 Q6ZSN1 163 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 DNAH10Q8IVF4 4471 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 A0A087WX48 190 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 PKIAP61925 76 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 LAGE3Q14657 143 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 ELOBQ15370 118 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 SMIM15Q7Z3B0 74 aa8.37□□□□□ -1.07
CBWD3-208ENST00000612050 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 MUC21A0A0G2JKD1 596 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 MUC21A0A140T8X8 626 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 MGPP08493 103 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 NKX2-5P52952 324 aaPredicted RBP8.36□□□□□ -1.07
CBWD3-208ENST00000612050 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 RMI2Q96E14 147 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 Q9HAA7 133 aa8.36□□□□□ -1.07
CBWD3-208ENST00000612050 IGLV2-8P01709 118 aa8.35□□□□□ -1.07
CBWD3-208ENST00000612050 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
CBWD3-208ENST00000612050 CDPF1Q6NVV7 123 aa8.35□□□□□ -1.07
CBWD3-208ENST00000612050 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
CBWD3-208ENST00000612050 RPP21Q9H633 154 aaKnown RBP8.35□□□□□ -1.07
CBWD3-208ENST00000612050 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
CBWD3-208ENST00000612050 COX11Q9Y6N1 276 aa8.35□□□□□ -1.07
CBWD3-208ENST00000612050 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
CBWD3-208ENST00000612050 IGLC6P0CF74 106 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 GZMBP10144 247 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
CBWD3-208ENST00000612050 NUDT10Q8NFP7 164 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 OR10G8Q8NGN5 311 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 LYPD6BQ8NI32 183 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 NUDT11Q96G61 164 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 CHCHD7Q9BUK0 85 aa8.34□□□□□ -1.07
CBWD3-208ENST00000612050 TRBV20OR9-2A0A075B6H5 130 aa8.33□□□□□ -1.08
CBWD3-208ENST00000612050 A0A1B0GVG6 124 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms