RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 IL36BQ9NZH7 164 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 TRAV1-1A0A0B4J248 108 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 EREGO14944 169 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
CTSA-218ENST00000607814 FAM74A4Q5TZK3 123 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 TEX261Q6UWH6 196 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 ALKAL2Q6UX46 152 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 PTH2Q96A98 100 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 MANBALQ9NQG1 85 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
CTSA-218ENST00000607814 TRBV6-4A0A1B0GX49 114 aa9.22□□□□□ -0.93
CTSA-218ENST00000607814 S100A9P06702 114 aaKnown RBP9.22□□□□□ -0.93
CTSA-218ENST00000607814 MGST1P10620 155 aaKnown RBP9.22□□□□□ -0.93
CTSA-218ENST00000607814 RHOHQ15669 191 aa9.22□□□□□ -0.93
CTSA-218ENST00000607814 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
CTSA-218ENST00000607814 A8MWV9 139 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 IGLV2-8P01709 118 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 GZMBP10144 247 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 CENPWQ5EE01 88 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 DNLZQ5SXM8 178 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
CTSA-218ENST00000607814 SYT8Q8NBV8 401 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 MED9Q9NWA0 146 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 LY96Q9Y6Y9 160 aa9.21□□□□□ -0.94
CTSA-218ENST00000607814 TEX46H3BTG2 121 aa9.2□□□□□ -0.94
CTSA-218ENST00000607814 CRYGDP07320 174 aa9.2□□□□□ -0.94
CTSA-218ENST00000607814 IFITM2Q01629 132 aa9.2□□□□□ -0.94
CTSA-218ENST00000607814 OR10AG1Q8NH19 301 aa9.2□□□□□ -0.94
CTSA-218ENST00000607814 ATP6V0E2Q8NHE4 81 aa9.2□□□□□ -0.94
CTSA-218ENST00000607814 C11orf52Q96A22 123 aa9.2□□□□□ -0.94
CTSA-218ENST00000607814 IGHV3-30P01768 117 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 IGHV3-33P01772 117 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 IGHV3-30-3P0DP02 117 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 IGHV3-30-5P0DP03 117 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 BCL2P10415 239 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 ERVFC1-1P60608 527 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 MEF2BQ02080 365 aaPredicted RBP9.19□□□□□ -0.94
CTSA-218ENST00000607814 OR10J3Q5JRS4 329 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 Q8N3U1 123 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 SFRP2Q96HF1 295 aa9.19□□□□□ -0.94
CTSA-218ENST00000607814 TRBV20OR9-2A0A075B6H5 130 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 RBFOX3A6NFN3 312 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 FAM229AH3BQW9 127 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 CIDEAO60543 219 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 IFNA1P01562 189 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 ZFP2Q6ZN57 461 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 ZFP82Q8N141 532 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 TPPP3Q9BW30 176 aa9.18□□□□□ -0.94
CTSA-218ENST00000607814 J3QL48 77 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 DNAH10OSP0CZ25 163 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 EVI2AP22794 236 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 GNG4P50150 75 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 RAB14P61106 215 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 PIK3CD-AS1Q5SR53 167 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 SH2D6Q7Z4S9 175 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 VAX2Q9UIW0 290 aa9.17□□□□□ -0.94
CTSA-218ENST00000607814 IGHV3-38A0A0C4DH36 116 aa9.16□□□□□ -0.94
CTSA-218ENST00000607814 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
CTSA-218ENST00000607814 DAZAP1Q96EP5 407 aaKnown RBP9.16□□□□□ -0.94
CTSA-218ENST00000607814 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 C19orf71A6NCJ1 209 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 PDE6DO43924 150 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 LELP1Q5T871 98 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 NFE4Q86UQ8 179 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 Q9HAA7 133 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 MSRB1Q9NZV6 116 aa9.15□□□□□ -0.94
CTSA-218ENST00000607814 RHODO00212 210 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 SNAI2O43623 268 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 CEBPGP53567 150 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 TIRAPP58753 221 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 ZNF56Q15929 161 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 CLLU1Q5K131 121 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 SSBP4Q9BWG4 385 aaPredicted RBP9.14□□□□□ -0.95
CTSA-218ENST00000607814 HMCN2Q8NDA2 5059 aa9.14□□□□□ -0.95
CTSA-218ENST00000607814 F5H697 171 aa9.13□□□□□ -0.95
CTSA-218ENST00000607814 K7EN84 100 aa9.13□□□□□ -0.95
CTSA-218ENST00000607814 RNASE7Q9H1E1 156 aaKnown RBP9.13□□□□□ -0.95
CTSA-218ENST00000607814 P01737 135 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 SMR3BP02814 79 aaPredicted RBP9.12□□□□□ -0.95
CTSA-218ENST00000607814 CXCL1P09341 107 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 OR5AL1P0C617 328 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 LINC01556Q5JQF7 62 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 FER1L6-AS1Q8NA97 138 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 NUDT10Q8NFP7 164 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 NUDT11Q96G61 164 aa9.12□□□□□ -0.95
CTSA-218ENST00000607814 A0A087WTM6 91 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 IGLC6P0CF74 106 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 GCSHP23434 173 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 TOR2AQ5JU69 321 aa9.11□□□□□ -0.95
CTSA-218ENST00000607814 SERTAD4-AS1Q5TG53 156 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms