RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 SH2D1AO60880 128 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 EMP1P54849 157 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 PKIAP61925 76 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 FAM222AQ5U5X8 452 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 C18orf32Q8TCD1 76 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 ALKBH7Q9BT30 221 aaPredicted RBP9.43□□□□□ -0.9
CTSA-212ENST00000606394 NRN1Q9NPD7 142 aa9.43□□□□□ -0.9
CTSA-212ENST00000606394 F2Z2F3 143 aa9.42□□□□□ -0.9
CTSA-212ENST00000606394 NUPR1O60356 82 aa9.42□□□□□ -0.9
CTSA-212ENST00000606394 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
CTSA-212ENST00000606394 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
CTSA-212ENST00000606394 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
CTSA-212ENST00000606394 SSBP4Q9BWG4 385 aaPredicted RBP9.42□□□□□ -0.9
CTSA-212ENST00000606394 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
CTSA-212ENST00000606394 MYCBP2O75592 4640 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
CTSA-212ENST00000606394 SCGB1D1O95968 90 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 AMTP48728 403 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 VGLL1Q99990 258 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 NAGKQ9UJ70 344 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
CTSA-212ENST00000606394 LINC00587B1AMM8 73 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 EPM2AB3EWF7 344 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 GPX1P07203 203 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 HTN3P15516 51 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 CRIP1P50238 77 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 TMEM78Q5T7P6 136 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 ZNRF2Q8NHG8 242 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 Q8TAT8 98 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 C16orf92Q96LL3 132 aa9.4□□□□□ -0.9
CTSA-212ENST00000606394 ARMS2P0C7Q2 107 aa9.39□□□□□ -0.91
CTSA-212ENST00000606394 PMCHP20382 165 aa9.39□□□□□ -0.91
CTSA-212ENST00000606394 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
CTSA-212ENST00000606394 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
CTSA-212ENST00000606394 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 HSBP1O75506 76 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 RAB4AP20338 218 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 CTRLP40313 264 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 ID1P41134 155 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 ZNF138P52744 262 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 DAD1P61803 113 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
CTSA-212ENST00000606394 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
CTSA-212ENST00000606394 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
CTSA-212ENST00000606394 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
CTSA-212ENST00000606394 PRAC2D3DTV9 90 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 ERCC8Q13216 396 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 ZNF738Q8NE65 137 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 PPP1R14DQ9NXH3 145 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
CTSA-212ENST00000606394 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 SOCS3O14543 225 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 INAFM2P0DMQ5 153 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 PRB4P10163 310 aaPredicted RBP9.36□□□□□ -0.91
CTSA-212ENST00000606394 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
CTSA-212ENST00000606394 NTF3P20783 257 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 CCL18P55774 89 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 RRN3P1Q2M238 152 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 FOXI2Q6ZQN5 318 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 FER1L6-AS1Q8NA97 138 aa9.36□□□□□ -0.91
CTSA-212ENST00000606394 M0R2Z0 102 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 ORM1P02763 201 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 IGLC6P0CF74 106 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 DDTP30046 118 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 ZNF80P51504 273 aaPredicted RBP9.35□□□□□ -0.91
CTSA-212ENST00000606394 KRTDAPP60985 99 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 OR10J6PQ8NGY7 276 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 PRO1933Q9H354 126 aa9.35□□□□□ -0.91
CTSA-212ENST00000606394 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
CTSA-212ENST00000606394 CTAG1AP78358 180 aa9.34□□□□□ -0.91
CTSA-212ENST00000606394 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
CTSA-212ENST00000606394 NIT1Q86X76 327 aa9.34□□□□□ -0.91
CTSA-212ENST00000606394 LINC00477Q96M19 166 aa9.34□□□□□ -0.91
CTSA-212ENST00000606394 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
CTSA-212ENST00000606394 IGKV3-20P01619 116 aa9.33□□□□□ -0.92
CTSA-212ENST00000606394 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
CTSA-212ENST00000606394 C1orf158Q8N1D5 194 aa9.33□□□□□ -0.92
CTSA-212ENST00000606394 ZNF664Q8N3J9 261 aa9.33□□□□□ -0.92
CTSA-212ENST00000606394 FAT1Q14517 4588 aa9.32□□□□□ -0.92
CTSA-212ENST00000606394 FXYD7P58549 80 aa9.32□□□□□ -0.92
CTSA-212ENST00000606394 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
CTSA-212ENST00000606394 VAMP8Q9BV40 100 aa9.32□□□□□ -0.92
CTSA-212ENST00000606394 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
CTSA-212ENST00000606394 LINC00588Q9Y4M8 146 aa9.32□□□□□ -0.92
CTSA-212ENST00000606394 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
CTSA-212ENST00000606394 TRBV7-9A0A0J9YWB2 115 aa9.31□□□□□ -0.92
CTSA-212ENST00000606394 NUDT3O95989 172 aa9.31□□□□□ -0.92
CTSA-212ENST00000606394 OR5AL1P0C617 328 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms