RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 A0A087WWL8 130 aa7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 UBE2D3P61077 147 aa7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 CNBPP62633 177 aaKnown RBP7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 UBE2D2P62837 147 aa7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
PDLIM1P1-201ENST00000604187 TRAV6A0A075B6T7 132 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 TRBV6-8A0A0A6YYG3 113 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 TCRAP04437 139 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 RPL36AP83881 106 aaKnown RBP7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 CNPY1Q3B7I2 92 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 CLRN3Q8NCR9 226 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 RPL36ALQ969Q0 106 aaKnown RBP7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 PLAC8Q9NZF1 115 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 PSG8Q9UQ74 426 aa7.41□□□□□ -1.22
PDLIM1P1-201ENST00000604187 SERTM2A0A1B0GWG4 89 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 hDV102S1A0JD36 115 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 H3BVH4 76 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 GTSF1Q8WW33 167 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 CHCHD5Q9BSY4 110 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
PDLIM1P1-201ENST00000604187 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 K7EQM0 130 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 PTTG1O95997 202 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 PQLC2Q6ZP29 291 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 C5orf17Q8NAS9 161 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 OR11H4Q8NGC9 324 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SDHCQ99643 169 aaPredicted RBP7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 NUDT15Q9NV35 164 aa7.39□□□□□ -1.23
PDLIM1P1-201ENST00000604187 KRTAP9-6A0A140TA67 174 aa7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 IL7P13232 177 aa7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 FLI1Q01543 452 aaPredicted RBP7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 PRR34Q9NV39 138 aa7.38□□□□□ -1.23
PDLIM1P1-201ENST00000604187 IGLV10-54A0A075B6I4 117 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 A0A1W2PPV4 95 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 B4DEV8 164 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 TCRBP04435 133 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 PKIAP61925 76 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SAPCD1Q5SSQ6 148 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SFRP2Q96HF1 295 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
PDLIM1P1-201ENST00000604187 H0YIZ8 118 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 M0R381 172 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 PLA2G10O15496 165 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SLPIP03973 132 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 ARMS2P0C7Q2 107 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 ARL14EPLP0DKL9 152 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 RAB2AP61019 212 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 RBX1P62877 108 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 OR10G8Q8NGN5 311 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SCGB1C1Q8TD33 95 aa7.36□□□□□ -1.23
PDLIM1P1-201ENST00000604187 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 M0R036 132 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 LYRM1O43325 122 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SIX6O95475 246 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 SMIM3Q9BZL3 60 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 PHLDA3Q9Y5J5 127 aa7.35□□□□□ -1.23
PDLIM1P1-201ENST00000604187 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 MUC21A0A0G2JKD1 596 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 CCDC160A6NGH7 325 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 FABP5P3A8MUU1 101 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 GAGE6Q13070 117 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 NEXN-AS1Q8NBZ9 246 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 EPDR1Q9UM22 224 aa7.34□□□□□ -1.23
PDLIM1P1-201ENST00000604187 TRAV34A0A0B4J273 112 aa7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 KRBOX1C9JBD0 128 aa7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TPT1P13693 172 aaKnown RBP7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 SUMO1P63165 101 aaKnown RBP7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 COX6A2Q02221 97 aa7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 REG3AQ06141 175 aa7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 ARL2-SNX15V9GYD0 113 aa7.33□□□□□ -1.24
PDLIM1P1-201ENST00000604187 GCHFRP30047 84 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 RAB5CP51148 216 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 ZNF56Q15929 161 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 DNLZQ5SXM8 178 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 NTM-AS1Q6ZSK4 140 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 ZFP82Q8N141 532 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 STPG4Q8N801 248 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 RBM38Q9H0Z9 239 aaKnown RBP7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 HSPB11Q9Y547 144 aa7.32□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TMSB15BA0A087X1C1 80 aa7.31□□□□□ -1.24
PDLIM1P1-201ENST00000604187 STAG3L2P0CL84 134 aa7.31□□□□□ -1.24
PDLIM1P1-201ENST00000604187 STAG3L3P0CL85 134 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms