RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 GATCO43716 136 aaKnown RBP13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 ISOC2Q96AB3 205 aa13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 C18orf15Q96N68 181 aa13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 RNASE7Q9H1E1 156 aaKnown RBP13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 OSTCQ9NRP0 149 aa13.14□□□□□ -0.31
PPFIA3-210ENST00000602800 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 NXPH4O95158 308 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 CXCL1P09341 107 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 FUSP35637 526 aaKnown RBP eCLIP13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 XGP55808 180 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 Q5VSD8 79 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 SLC7A5P1Q8MH63 180 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 GSN-AS1Q9NRJ2 163 aa13.13□□□□□ -0.31
PPFIA3-210ENST00000602800 TCL1AP56279 114 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 RPL19P84098 196 aaKnown RBP13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 DNLZQ5SXM8 178 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 OR10G8Q8NGN5 311 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 SFRP2Q96HF1 295 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 SPXQ9BT56 116 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 ICOSQ9Y6W8 199 aa13.12□□□□□ -0.31
PPFIA3-210ENST00000602800 GRIFINA4D1Z8 144 aa13.11□□□□□ -0.31
PPFIA3-210ENST00000602800 PAX4O43316 350 aa13.11□□□□□ -0.31
PPFIA3-210ENST00000602800 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
PPFIA3-210ENST00000602800 C11orf72Q8NBR9 251 aa13.11□□□□□ -0.31
PPFIA3-210ENST00000602800 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
PPFIA3-210ENST00000602800 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
PPFIA3-210ENST00000602800 C10orf91Q5T1B1 145 aa13.1□□□□□ -0.31
PPFIA3-210ENST00000602800 A8MWL6 223 aa13.09□□□□□ -0.31
PPFIA3-210ENST00000602800 PPP1R2P9O14990 202 aa13.09□□□□□ -0.31
PPFIA3-210ENST00000602800 CT83Q5H943 113 aa13.09□□□□□ -0.31
PPFIA3-210ENST00000602800 IL36BQ9NZH7 164 aa13.09□□□□□ -0.31
PPFIA3-210ENST00000602800 TNFRSF18Q9Y5U5 241 aa13.09□□□□□ -0.31
PPFIA3-210ENST00000602800 TRAV9-2A0A087WT02 112 aa13.08□□□□□ -0.32
PPFIA3-210ENST00000602800 MT-ND4LP03901 98 aa13.08□□□□□ -0.32
PPFIA3-210ENST00000602800 ARMS2P0C7Q2 107 aa13.08□□□□□ -0.32
PPFIA3-210ENST00000602800 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.32
PPFIA3-210ENST00000602800 C9orf85Q96MD7 179 aa13.08□□□□□ -0.32
PPFIA3-210ENST00000602800 A0A087WTM6 91 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 H3BVH4 76 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 SPINK4O60575 86 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 SLAQ13239 276 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 ANAPC16Q96DE5 110 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 PRO0255Q9UI72 69 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 MYCBP2O75592 4640 aa13.07□□□□□ -0.32
PPFIA3-210ENST00000602800 M0R2P5 195 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 IGHV3-53P01767 116 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 DNAH10OSP0CZ25 163 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 KRTAP10-1P60331 282 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 FER1L6-AS1Q8NA97 138 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 SYT8Q8NBV8 401 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 PHLDA3Q9Y5J5 127 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 V9GYV3 84 aa13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
PPFIA3-210ENST00000602800 F2Z2F3 143 aa13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 APOC3P02656 99 aa13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 GZMBP10144 247 aa13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 MRPL23Q16540 153 aaKnown RBP13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 LYPD5Q6UWN5 251 aa13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 PTH2Q96A98 100 aa13.05□□□□□ -0.32
PPFIA3-210ENST00000602800 FAM231BA6NCW3 169 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 NEGR1Q7Z3B1 354 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 SVBPQ8N300 66 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 TPPP3Q9BW30 176 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 GFRA4Q9GZZ7 299 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 HHLA3Q9XRX5 114 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 VPS13BQ7Z7G8 4022 aa13.04□□□□□ -0.32
PPFIA3-210ENST00000602800 K7EP13 123 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 SNAI2O43623 268 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 SNAPINO95295 136 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 SMR3BP02814 79 aaPredicted RBP13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 IGLC6P0CF74 106 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 CRYBA4P53673 196 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 ZFP82Q8N141 532 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 CTDSP1Q9GZU7 261 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 SRRM2Q9UQ35 2752 aaKnown RBP13.03□□□□□ -0.32
PPFIA3-210ENST00000602800 FAM229AH3BQW9 127 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 ATP6V1G1O75348 118 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 S100A1P23297 94 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 GCSHP23434 173 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 CACNG7P62955 275 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 ZNF876PQ49A33 203 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 PIK3CD-AS1Q5SR53 167 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 SPANXN1Q5VSR9 72 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 RASL10AQ92737 203 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 BORCS7Q96B45 105 aa13.02□□□□□ -0.33
PPFIA3-210ENST00000602800 EVI2AP22794 236 aa13.01□□□□□ -0.33
PPFIA3-210ENST00000602800 RHEBQ15382 184 aa13.01□□□□□ -0.33
PPFIA3-210ENST00000602800 WDR73Q6P4I2 378 aa13.01□□□□□ -0.33
PPFIA3-210ENST00000602800 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms