RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 ZNF705FA8MVS1 300 aaPredicted RBP3.71□□□□□ -1.82
VRK3-226ENST00000602029 DIRC3C9JPN6 131 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 F5H768 121 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 H3BMM0 161 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 IGKV1-17P01599 117 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 GIG44P09565 113 aaPredicted RBP3.71□□□□□ -1.82
VRK3-226ENST00000602029 ZNF705DP0CH99 300 aaPredicted RBP3.71□□□□□ -1.82
VRK3-226ENST00000602029 ZNF705BP0CI00 300 aaPredicted RBP3.71□□□□□ -1.82
VRK3-226ENST00000602029 CT45A10P0DMU9 189 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 HTN1P15515 57 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 BTF3P20290 206 aaKnown RBP3.71□□□□□ -1.82
VRK3-226ENST00000602029 CTRLP40313 264 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 CSN1S1P47710 185 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 LYZP61626 148 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 SLAQ13239 276 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 RIGQ13278 110 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 PSG3Q16557 428 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 MRPL54Q6P161 138 aaKnown RBP3.71□□□□□ -1.82
VRK3-226ENST00000602029 ZNF493Q6ZR52 646 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 SPATA12Q7Z6I5 190 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 DCANP1Q8TF63 244 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 TMEM70Q9BUB7 260 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 LAMTOR2Q9Y2Q5 125 aa3.71□□□□□ -1.82
VRK3-226ENST00000602029 A0A087X0K7 114 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 TRAV5A0A0B4J249 113 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 A0A1B0GUT8 65 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 MRPS12O15235 138 aaKnown RBP3.7□□□□□ -1.82
VRK3-226ENST00000602029 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 HLA-DRB4P13762 266 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 CCL18P55774 89 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 DEFB1P60022 68 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 TNP2Q05952 138 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 COL5A1-AS1Q5SY13 56 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 PET117Q6UWS5 81 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 C6orf223Q8N319 242 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 C15orf53Q8NAA6 179 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 GLMPQ8WWB7 406 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 C16orf92Q96LL3 132 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 SLC50A1Q9BRV3 221 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 PRO1933Q9H354 126 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 ST20Q9HBF5 79 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 SCRT2Q9NQ03 307 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 MRPL36Q9P0J6 103 aaKnown RBP3.7□□□□□ -1.82
VRK3-226ENST00000602029 DKK2Q9UBU2 259 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 HSPB8Q9UJY1 196 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 MRPS16Q9Y3D3 137 aaKnown RBP3.7□□□□□ -1.82
VRK3-226ENST00000602029 HLA-DRB4X5D2U9 266 aa3.7□□□□□ -1.82
VRK3-226ENST00000602029 TRAV9-2A0A087WT02 112 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 F6UB75 175 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 M0R2Z0 102 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 NUPR1O60356 82 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 INSP01308 110 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 PPBPP02775 128 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 LINC00614P0C842 121 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 C3orf79P0CE67 100 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 IGLC3P0DOY3 106 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 TCL1AP56279 114 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 KRTDAPP60985 99 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 GDF5OSQ5U4N7 250 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 SAMD13Q5VXD3 122 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 PRR27Q6MZM9 219 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 FOXI2Q6ZQN5 318 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 NIT1Q86X76 327 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 Q8N976 141 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 BLNKQ8WV28 456 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 PMCHL2Q9BQD1 86 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 SNHG12Q9BXW3 62 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 CNFNQ9BYD5 112 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 TMEM191AQ9H0A3 160 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 LENEPQ9Y5L5 61 aa3.69□□□□□ -1.82
VRK3-226ENST00000602029 TRAV34A0A0B4J273 112 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 TRBV7-9A0A0J9YWB2 115 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 NBDYA0A0U1RRE5 68 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 HSBP1L1C9JCN9 74 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 F2Z2F3 143 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 LEPROTL1O95214 131 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 GNG5P63218 68 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 SPINK13Q1W4C9 94 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 SPATA45Q537H7 98 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 ZNF705AQ6ZN79 300 aaPredicted RBP3.68□□□□□ -1.82
VRK3-226ENST00000602029 Q6ZR54 194 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 GOLT1AQ6ZVE7 132 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 ZNF738Q8NE65 137 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 OR2D3Q8NGH3 330 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 LINC00479Q96M42 142 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 LINC01587Q99440 93 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 MAP1LC3CQ9BXW4 147 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 AP5S1Q9NUS5 200 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 PSG8Q9UQ74 426 aa3.68□□□□□ -1.82
VRK3-226ENST00000602029 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
VRK3-226ENST00000602029 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 A0A1B0GV90 55 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 SYS1-DBNDD2H3BUS1 97 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 K7EMI3 77 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 EREGO14944 169 aa3.67□□□□□ -1.82
VRK3-226ENST00000602029 TCAPO15273 167 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms