RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 VAX2Q9UIW0 290 aa11.67□□□□□ -0.54
HERC3-214ENST00000601319 SNAI2O43623 268 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 OR5AL1P0C617 328 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 LINC01556Q5JQF7 62 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 LELP1Q5T871 98 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 ATP6V0E2Q8NHE4 81 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 GTSF1LQ9H1H1 148 aa11.66□□□□□ -0.54
HERC3-214ENST00000601319 TRAV8-6A0A0B4J262 113 aa11.65□□□□□ -0.54
HERC3-214ENST00000601319 IGHV3-38A0A0C4DH36 116 aa11.65□□□□□ -0.54
HERC3-214ENST00000601319 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
HERC3-214ENST00000601319 CRYGDP07320 174 aa11.65□□□□□ -0.54
HERC3-214ENST00000601319 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
HERC3-214ENST00000601319 OR10AG1Q8NH19 301 aa11.65□□□□□ -0.54
HERC3-214ENST00000601319 GNG4P50150 75 aa11.64□□□□□ -0.55
HERC3-214ENST00000601319 C14orf178Q8N769 122 aaPredicted RBP11.64□□□□□ -0.55
HERC3-214ENST00000601319 MSRB1Q9NZV6 116 aa11.64□□□□□ -0.55
HERC3-214ENST00000601319 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
HERC3-214ENST00000601319 A0A087WWL8 130 aa11.63□□□□□ -0.55
HERC3-214ENST00000601319 TRBV10-1A0A0K0K1A3 114 aa11.63□□□□□ -0.55
HERC3-214ENST00000601319 ALKAL2Q6UX46 152 aa11.63□□□□□ -0.55
HERC3-214ENST00000601319 MED9Q9NWA0 146 aa11.63□□□□□ -0.55
HERC3-214ENST00000601319 RAB19A4D1S5 217 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 C19orf71A6NCJ1 209 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 GAGE12JA6NER3 117 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 GAGE1Q13065 139 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 GAGE4Q13068 117 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 GAGE5Q13069 117 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 GAGE13Q4V321 117 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 BIN3Q9NQY0 253 aa11.62□□□□□ -0.55
HERC3-214ENST00000601319 A0A087WWC5 75 aa11.61□□□□□ -0.55
HERC3-214ENST00000601319 A0A1B0GVG6 124 aa11.61□□□□□ -0.55
HERC3-214ENST00000601319 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
HERC3-214ENST00000601319 RPS20P60866 119 aaKnown RBP11.61□□□□□ -0.55
HERC3-214ENST00000601319 Q9UF83 564 aa11.61□□□□□ -0.55
HERC3-214ENST00000601319 IGLC6P0CF74 106 aa11.6□□□□□ -0.55
HERC3-214ENST00000601319 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
HERC3-214ENST00000601319 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
HERC3-214ENST00000601319 SPATA12Q7Z6I5 190 aa11.6□□□□□ -0.55
HERC3-214ENST00000601319 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
HERC3-214ENST00000601319 TNFRSF18Q9Y5U5 241 aa11.6□□□□□ -0.55
HERC3-214ENST00000601319 RAB4BP61018 213 aa11.59□□□□□ -0.55
HERC3-214ENST00000601319 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
HERC3-214ENST00000601319 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
HERC3-214ENST00000601319 XKRY2A2RUG3 117 aa11.58□□□□□ -0.56
HERC3-214ENST00000601319 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
HERC3-214ENST00000601319 TMEM250H0YL14 139 aa11.58□□□□□ -0.56
HERC3-214ENST00000601319 P01737 135 aa11.58□□□□□ -0.56
HERC3-214ENST00000601319 LAGE3Q14657 143 aa11.58□□□□□ -0.56
HERC3-214ENST00000601319 OR2D3Q8NGH3 330 aa11.58□□□□□ -0.56
HERC3-214ENST00000601319 NKX2-5P52952 324 aaPredicted RBP11.57□□□□□ -0.56
HERC3-214ENST00000601319 RPL36AP83881 106 aaKnown RBP11.57□□□□□ -0.56
HERC3-214ENST00000601319 ZNF56Q15929 161 aa11.57□□□□□ -0.56
HERC3-214ENST00000601319 FER1L6-AS1Q8NA97 138 aa11.57□□□□□ -0.56
HERC3-214ENST00000601319 RPL36ALQ969Q0 106 aaKnown RBP11.57□□□□□ -0.56
HERC3-214ENST00000601319 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 RBFOX3A6NFN3 312 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 EREGO14944 169 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 NDUFS6O75380 124 aaKnown RBP11.56□□□□□ -0.56
HERC3-214ENST00000601319 GZMBP10144 247 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 UBE2D3P61077 147 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 UBE2D2P62837 147 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
HERC3-214ENST00000601319 A0A087WTM6 91 aa11.55□□□□□ -0.56
HERC3-214ENST00000601319 MUC21A0A0G2JKD1 596 aa11.55□□□□□ -0.56
HERC3-214ENST00000601319 MUC21A0A140T8X8 626 aa11.55□□□□□ -0.56
HERC3-214ENST00000601319 F2Z2F3 143 aa11.55□□□□□ -0.56
HERC3-214ENST00000601319 CDK2AP2O75956 126 aa11.55□□□□□ -0.56
HERC3-214ENST00000601319 CACNG7P62955 275 aa11.55□□□□□ -0.56
HERC3-214ENST00000601319 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 IGHV3-33P01772 117 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 SMIM17P0DL12 118 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 CTRLP40313 264 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
HERC3-214ENST00000601319 K7EN84 100 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 NEXN-AS1Q8NBZ9 246 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 NUDT10Q8NFP7 164 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 NUDT11Q96G61 164 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 TPPP3Q9BW30 176 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 PGPEP1Q9NXJ5 209 aa11.53□□□□□ -0.56
HERC3-214ENST00000601319 LRP1BQ9NZR2 4599 aa11.52□□□□□ -0.56
HERC3-214ENST00000601319 Q8N3U1 123 aa11.52□□□□□ -0.57
HERC3-214ENST00000601319 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
HERC3-214ENST00000601319 CHCHD7Q9BUK0 85 aa11.52□□□□□ -0.57
HERC3-214ENST00000601319 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.57
HERC3-214ENST00000601319 RYR1P21817 5038 aa11.51□□□□□ -0.57
HERC3-214ENST00000601319 TOR2AQ5JU69 321 aa11.51□□□□□ -0.57
HERC3-214ENST00000601319 WDR73Q6P4I2 378 aa11.51□□□□□ -0.57
HERC3-214ENST00000601319 NIT1Q86X76 327 aa11.51□□□□□ -0.57
HERC3-214ENST00000601319 FAM210AQ96ND0 272 aa11.51□□□□□ -0.57
HERC3-214ENST00000601319 F5H697 171 aa11.5□□□□□ -0.57
HERC3-214ENST00000601319 PSCAO43653 123 aa11.5□□□□□ -0.57
HERC3-214ENST00000601319 TRGC1P0CF51 173 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms