RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 DEFB131BA0A096LNP1 70 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 CRYGDP07320 174 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 SMIM17P0DL12 118 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 NANOS2P60321 138 aaKnown RBP8.68□□□□□ -1.02
TGFB1-204ENST00000600196 RAB4BP61018 213 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 TWIST1Q15672 202 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 Q6ZTC4 211 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 POM121L12Q8N7R1 296 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 MUC7Q8TAX7 377 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
TGFB1-204ENST00000600196 PGLYRP4Q96LB8 373 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 TPPP3Q9BW30 176 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 TMEM191AQ9H0A3 160 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 RPS10P5Q9NQ39 176 aa8.68□□□□□ -1.02
TGFB1-204ENST00000600196 TRBV10-1A0A0K0K1A3 114 aa8.67□□□□□ -1.02
TGFB1-204ENST00000600196 FHL2Q14192 279 aa8.67□□□□□ -1.02
TGFB1-204ENST00000600196 CEMP1Q6PRD7 247 aaPredicted RBP8.67□□□□□ -1.02
TGFB1-204ENST00000600196 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
TGFB1-204ENST00000600196 C15orf53Q8NAA6 179 aa8.67□□□□□ -1.02
TGFB1-204ENST00000600196 KIF25-AS1Q9Y6Z4 181 aa8.67□□□□□ -1.02
TGFB1-204ENST00000600196 TRGV4A0A0C4DH28 118 aa8.66□□□□□ -1.02
TGFB1-204ENST00000600196 H7C1H1 209 aa8.66□□□□□ -1.02
TGFB1-204ENST00000600196 IGHV3-53P01767 116 aa8.66□□□□□ -1.02
TGFB1-204ENST00000600196 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
TGFB1-204ENST00000600196 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
TGFB1-204ENST00000600196 TGP01266 2768 aa8.65□□□□□ -1.02
TGFB1-204ENST00000600196 A0A1B0GXF2 115 aa8.65□□□□□ -1.02
TGFB1-204ENST00000600196 PPP1R17O96001 155 aa8.65□□□□□ -1.02
TGFB1-204ENST00000600196 HBBP68871 147 aa8.65□□□□□ -1.02
TGFB1-204ENST00000600196 ZNF479Q96JC4 524 aa8.65□□□□□ -1.02
TGFB1-204ENST00000600196 PRADC1Q9BSG0 188 aa8.65□□□□□ -1.02
TGFB1-204ENST00000600196 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 F5H768 121 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 CRYBA4P53673 196 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 LINC00315P59091 139 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 RHOHQ15669 191 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 C14orf178Q8N769 122 aaPredicted RBP8.64□□□□□ -1.03
TGFB1-204ENST00000600196 SMCO4Q9NRQ5 59 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 MSRB1Q9NZV6 116 aa8.64□□□□□ -1.03
TGFB1-204ENST00000600196 TRAV26-1A0A087WT03 109 aa8.63□□□□□ -1.03
TGFB1-204ENST00000600196 PAX4O43316 350 aa8.63□□□□□ -1.03
TGFB1-204ENST00000600196 PPBPP02775 128 aa8.63□□□□□ -1.03
TGFB1-204ENST00000600196 EVI2AP22794 236 aa8.63□□□□□ -1.03
TGFB1-204ENST00000600196 FAM3BP58499 235 aaPredicted RBP8.63□□□□□ -1.03
TGFB1-204ENST00000600196 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
TGFB1-204ENST00000600196 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
TGFB1-204ENST00000600196 MT-ND6P03923 174 aa8.62□□□□□ -1.03
TGFB1-204ENST00000600196 HOXA5P20719 270 aa8.62□□□□□ -1.03
TGFB1-204ENST00000600196 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
TGFB1-204ENST00000600196 SAMD10Q9BYL1 202 aa8.62□□□□□ -1.03
TGFB1-204ENST00000600196 A0A087WWL8 130 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 TIRAPP58753 221 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 FAM104BQ5XKR9 115 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 SLC25A29Q8N8R3 303 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 GNB1LQ9BYB4 327 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 JPT2Q9H910 190 aa8.61□□□□□ -1.03
TGFB1-204ENST00000600196 MUC21A0A0G2JKD1 596 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 MUC21A0A140T8X8 626 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 F5H697 171 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 K7EQD1 137 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 M0QY20 66 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 PHOX2AO14813 284 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 RAB4AP20338 218 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 ELOBQ15370 118 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.6□□□□□ -1.03
TGFB1-204ENST00000600196 VSIG2Q96IQ7 327 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 LAMTOR2Q9Y2Q5 125 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 ICOSQ9Y6W8 199 aa8.6□□□□□ -1.03
TGFB1-204ENST00000600196 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 HTN3P15516 51 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 CAMPP49913 170 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
TGFB1-204ENST00000600196 ZNF56Q15929 161 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 TMEM97Q5BJF2 176 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 MRPL54Q6P161 138 aaKnown RBP8.59□□□□□ -1.03
TGFB1-204ENST00000600196 TMEM88Q6PEY1 159 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
TGFB1-204ENST00000600196 NIT2Q9NQR4 276 aa8.59□□□□□ -1.03
TGFB1-204ENST00000600196 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 IGLL5B9A064 214 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 CASC10Q5T4H9 136 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 ATRAIDQ6UW56 229 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
TGFB1-204ENST00000600196 ATP6V1G1O75348 118 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 SSTP61278 116 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 RPL32P62910 135 aaKnown RBP8.57□□□□□ -1.04
TGFB1-204ENST00000600196 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 Q6ZSN1 163 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 DAZ4Q86SG3 579 aaKnown RBP8.57□□□□□ -1.04
TGFB1-204ENST00000600196 RNF185Q96GF1 192 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 C20orf78Q9BR46 151 aa8.57□□□□□ -1.04
TGFB1-204ENST00000600196 DAZ3Q9NR90 486 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms