RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 SMKR1H3BMG3 65 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 SIVA1O15304 175 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 FOXI2Q6ZQN5 318 aa11.24□□□□□ -0.61
VRK3-218ENST00000600031 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
VRK3-218ENST00000600031 BOD1L2Q8IYS8 172 aa11.23□□□□□ -0.61
VRK3-218ENST00000600031 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
VRK3-218ENST00000600031 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
VRK3-218ENST00000600031 CBY3A6NI87 242 aa11.22□□□□□ -0.61
VRK3-218ENST00000600031 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
VRK3-218ENST00000600031 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
VRK3-218ENST00000600031 FCER1GP30273 86 aa11.21□□□□□ -0.61
VRK3-218ENST00000600031 OR2K2Q8NGT1 345 aa11.21□□□□□ -0.61
VRK3-218ENST00000600031 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.61
VRK3-218ENST00000600031 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
VRK3-218ENST00000600031 DUSP14O95147 198 aaKnown RBP11.21□□□□□ -0.62
VRK3-218ENST00000600031 TNFRSF6BO95407 300 aa11.21□□□□□ -0.62
VRK3-218ENST00000600031 KLLNB2CW77 178 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 H3BMM0 161 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 SNAI2O43623 268 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 RNASE4P34096 147 aaKnown RBP11.2□□□□□ -0.62
VRK3-218ENST00000600031 FXYD7P58549 80 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 NOTCH3Q9UM47 2321 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 A6NDN8 102 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 HSD52Q0P140 79 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 AMMECR1LQ6DCA0 310 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 C3orf56Q8N813 242 aa11.2□□□□□ -0.62
VRK3-218ENST00000600031 C7orf71A4D174 169 aa11.19□□□□□ -0.62
VRK3-218ENST00000600031 BEAN1Q3B7T3 259 aa11.19□□□□□ -0.62
VRK3-218ENST00000600031 SMIM15Q7Z3B0 74 aa11.19□□□□□ -0.62
VRK3-218ENST00000600031 A8MTW9 85 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 CD7P09564 240 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 LEPP41159 167 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 ERASQ7Z444 233 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
VRK3-218ENST00000600031 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
VRK3-218ENST00000600031 PRSS47A8MTI9 375 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 OR11H12B2RN74 326 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 H3BRM9 83 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
VRK3-218ENST00000600031 RBX1P62877 108 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 Q8N8P6 123 aa11.18□□□□□ -0.62
VRK3-218ENST00000600031 STAB1Q9NY15 2570 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 ZMAT4Q9H898 229 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 ATP5LO75964 103 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 CDKN1BP46527 198 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 INSL3P51460 131 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 WFDC9Q8NEX5 89 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 DKK2Q9UBU2 259 aa11.17□□□□□ -0.62
VRK3-218ENST00000600031 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
VRK3-218ENST00000600031 TRAV8-6A0A0B4J262 113 aa11.16□□□□□ -0.62
VRK3-218ENST00000600031 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
VRK3-218ENST00000600031 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 ODF1Q14990 250 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 SHISA2Q6UWI4 295 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 C18orf15Q96N68 181 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 AP1S3Q96PC3 154 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 IGLV2-18A0A075B6J9 118 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 EVI2AP22794 236 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 NMUP48645 174 aa11.15□□□□□ -0.62
VRK3-218ENST00000600031 CMC4P56277 68 aaPredicted RBP11.15□□□□□ -0.62
VRK3-218ENST00000600031 COL6A5A8TX70 2615 aa11.14□□□□□ -0.63
VRK3-218ENST00000600031 PRSS1P07477 247 aa11.14□□□□□ -0.63
VRK3-218ENST00000600031 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
VRK3-218ENST00000600031 STHQ8IWL8 128 aa11.14□□□□□ -0.63
VRK3-218ENST00000600031 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
VRK3-218ENST00000600031 CST9LQ9H4G1 147 aa11.14□□□□□ -0.63
VRK3-218ENST00000600031 IGKCP01834 107 aa11.13□□□□□ -0.63
VRK3-218ENST00000600031 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
VRK3-218ENST00000600031 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
VRK3-218ENST00000600031 HIGD1BQ9P298 99 aa11.13□□□□□ -0.63
VRK3-218ENST00000600031 GAGE10A6NGK3 116 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 GATA1P15976 413 aaPredicted RBP11.12□□□□□ -0.63
VRK3-218ENST00000600031 PCP4P48539 62 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
VRK3-218ENST00000600031 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 DPM2O94777 84 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 LAGE3Q14657 143 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 NRACQ8N912 160 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
VRK3-218ENST00000600031 CMYA5Q8N3K9 4069 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms