RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 ASIPP42127 132 aa10.34□□□□□ -0.75
SMG9-208ENST00000598886 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
SMG9-208ENST00000598886 TEX261Q6UWH6 196 aa10.34□□□□□ -0.75
SMG9-208ENST00000598886 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
SMG9-208ENST00000598886 H3BVH4 76 aa10.33□□□□□ -0.76
SMG9-208ENST00000598886 DNAJC30Q96LL9 226 aa10.33□□□□□ -0.76
SMG9-208ENST00000598886 IFNA7P01567 189 aa10.32□□□□□ -0.76
SMG9-208ENST00000598886 UBE2G2P60604 165 aa10.32□□□□□ -0.76
SMG9-208ENST00000598886 EIF5AP63241 154 aaKnown RBP10.32□□□□□ -0.76
SMG9-208ENST00000598886 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
SMG9-208ENST00000598886 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
SMG9-208ENST00000598886 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
SMG9-208ENST00000598886 B4DEV8 164 aa10.31□□□□□ -0.76
SMG9-208ENST00000598886 LECT2O14960 151 aa10.31□□□□□ -0.76
SMG9-208ENST00000598886 SH2D1AO60880 128 aa10.31□□□□□ -0.76
SMG9-208ENST00000598886 TPT1P13693 172 aaKnown RBP10.31□□□□□ -0.76
SMG9-208ENST00000598886 FGF8P55075 233 aaPredicted RBP10.31□□□□□ -0.76
SMG9-208ENST00000598886 NIT1Q86X76 327 aa10.31□□□□□ -0.76
SMG9-208ENST00000598886 HIST1H2BAQ96A08 127 aa10.31□□□□□ -0.76
SMG9-208ENST00000598886 ZNF471Q9BX82 626 aaPredicted RBP10.31□□□□□ -0.76
SMG9-208ENST00000598886 A0A087WWC5 75 aa10.3□□□□□ -0.76
SMG9-208ENST00000598886 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
SMG9-208ENST00000598886 ARMS2P0C7Q2 107 aa10.3□□□□□ -0.76
SMG9-208ENST00000598886 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
SMG9-208ENST00000598886 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
SMG9-208ENST00000598886 ZNF674Q2M3X9 581 aa10.3□□□□□ -0.76
SMG9-208ENST00000598886 SFRP2Q96HF1 295 aa10.3□□□□□ -0.76
SMG9-208ENST00000598886 LRP1Q07954 4544 aaKnown RBP10.3□□□□□ -0.76
SMG9-208ENST00000598886 BORCS7-ASMTA0A0B4J1R7 106 aa10.29□□□□□ -0.76
SMG9-208ENST00000598886 M0R036 132 aa10.29□□□□□ -0.76
SMG9-208ENST00000598886 RHODO00212 210 aa10.29□□□□□ -0.76
SMG9-208ENST00000598886 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
SMG9-208ENST00000598886 ZFP30Q9Y2G7 519 aa10.29□□□□□ -0.76
SMG9-208ENST00000598886 GRIFINA4D1Z8 144 aa10.28□□□□□ -0.76
SMG9-208ENST00000598886 LTAP01374 205 aa10.28□□□□□ -0.76
SMG9-208ENST00000598886 ATRAIDQ6UW56 229 aa10.28□□□□□ -0.76
SMG9-208ENST00000598886 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
SMG9-208ENST00000598886 A0A087WWL8 130 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 MAP1LC3B2A6NCE7 125 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 LINC01620Q4KN68 170 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 EIF5AL1Q6IS14 154 aaKnown RBP10.27□□□□□ -0.77
SMG9-208ENST00000598886 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 BAALCQ8WXS3 180 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 FMC1Q96HJ9 113 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 MAP1LC3BQ9GZQ8 125 aa10.27□□□□□ -0.77
SMG9-208ENST00000598886 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.26□□□□□ -0.77
SMG9-208ENST00000598886 FHITP49789 147 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 UBE2D3P61077 147 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 UBE2D2P62837 147 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 NDUFA5Q16718 116 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 TOR2AQ5JU69 321 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
SMG9-208ENST00000598886 CLLU1Q5K131 121 aa10.25□□□□□ -0.77
SMG9-208ENST00000598886 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
SMG9-208ENST00000598886 ALKAL2Q6UX46 152 aa10.25□□□□□ -0.77
SMG9-208ENST00000598886 SCXQ7RTU7 201 aa10.25□□□□□ -0.77
SMG9-208ENST00000598886 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
SMG9-208ENST00000598886 TCEAL7Q9BRU2 100 aa10.25□□□□□ -0.77
SMG9-208ENST00000598886 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 PRR27Q6MZM9 219 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 CHCHD7Q9BUK0 85 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 KLK12Q9UKR0 248 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 PHLDA3Q9Y5J5 127 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 COX11Q9Y6N1 276 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 HMCN2Q8NDA2 5059 aa10.24□□□□□ -0.77
SMG9-208ENST00000598886 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
SMG9-208ENST00000598886 M0R381 172 aa10.23□□□□□ -0.77
SMG9-208ENST00000598886 SEC11BP0C7V7 166 aa10.23□□□□□ -0.77
SMG9-208ENST00000598886 RAB14P61106 215 aa10.23□□□□□ -0.77
SMG9-208ENST00000598886 ZFP82Q8N141 532 aa10.23□□□□□ -0.77
SMG9-208ENST00000598886 MLST8Q9BVC4 326 aa10.23□□□□□ -0.77
SMG9-208ENST00000598886 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
SMG9-208ENST00000598886 PLA2G1BP04054 148 aaKnown RBP10.22□□□□□ -0.77
SMG9-208ENST00000598886 UBE2G1P62253 170 aa10.22□□□□□ -0.77
SMG9-208ENST00000598886 IGKV2D-24A0A075B6R9 120 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 CXCL1P09341 107 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 RPL19P84098 196 aaKnown RBP10.21□□□□□ -0.77
SMG9-208ENST00000598886 ENHOQ6UWT2 76 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 Q8N976 141 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 OR10AG1Q8NH19 301 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 RMI2Q96E14 147 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 CHAC1Q9BUX1 264 aa10.21□□□□□ -0.77
SMG9-208ENST00000598886 SSBP4Q9BWG4 385 aaPredicted RBP10.21□□□□□ -0.77
SMG9-208ENST00000598886 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 SNAI2O43623 268 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 PAGE4O60829 102 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 SULT1A2P50226 295 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 RAB5CP51148 216 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
SMG9-208ENST00000598886 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 MBD3L1Q8WWY6 194 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
SMG9-208ENST00000598886 UBE2WQ96B02 151 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 URGCP-MRPS24S4R325 110 aa10.2□□□□□ -0.78
SMG9-208ENST00000598886 TRBV6-8A0A0A6YYG3 113 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms