RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 RNASE3P12724 160 aaKnown RBP7.22□□□□□ -1.25
VRK3-214ENST00000598553 GATA1P15976 413 aaPredicted RBP7.22□□□□□ -1.25
VRK3-214ENST00000598553 SRIP30626 198 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 TMEM241Q24JQ0 296 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 ZFP82Q8N141 532 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 Q8N3U1 123 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 KCNS1Q96KK3 526 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 Q9UF83 564 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 EPDR1Q9UM22 224 aa7.22□□□□□ -1.25
VRK3-214ENST00000598553 CDK2AP2O75956 126 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 RPL35P42766 123 aaKnown RBP7.21□□□□□ -1.26
VRK3-214ENST00000598553 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.26
VRK3-214ENST00000598553 CRIP1P50238 77 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 SNRPEP62304 92 aaKnown RBP7.21□□□□□ -1.26
VRK3-214ENST00000598553 ELOBQ15370 118 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 Q6ZSN1 163 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 OR4C5Q8NGB2 326 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 BTF3L4Q96K17 158 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 SMIM7Q9BQ49 75 aa7.21□□□□□ -1.26
VRK3-214ENST00000598553 TRBV24-1A0A075B6N3 115 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 RS1O15537 224 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
VRK3-214ENST00000598553 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 S100PP25815 95 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 S100A12P80511 92 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 ZNF674Q2M3X9 581 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 ANAPC16Q96DE5 110 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 JPT2Q9H910 190 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 ARL2-SNX15V9GYD0 113 aa7.2□□□□□ -1.26
VRK3-214ENST00000598553 A0A1W2PRE2 83 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 FBLL1A6NHQ2 334 aaKnown RBP7.19□□□□□ -1.26
VRK3-214ENST00000598553 Q86TA4 180 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 MAPKAPK5-AS1Q8N8E1 139 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 SLC25A29Q8N8R3 303 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 C12orf57Q99622 126 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 SAMD10Q9BYL1 202 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 LY96Q9Y6Y9 160 aa7.19□□□□□ -1.26
VRK3-214ENST00000598553 K7EP13 123 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 PEX7O00628 323 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 PPP1R2P9O14990 202 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 PAGE4O60829 102 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 FABP9Q0Z7S8 132 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 ZNF876PQ49A33 203 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 SH2D6Q7Z4S9 175 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 ZC2HC1AQ96GY0 325 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 PARLQ9H300 379 aa7.18□□□□□ -1.26
VRK3-214ENST00000598553 TRAV9-2A0A087WT02 112 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 A0A087WTM6 91 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 TIRAPP58753 221 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 KRTAP10-1P60331 282 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 RPL23P62829 140 aaKnown RBP7.17□□□□□ -1.26
VRK3-214ENST00000598553 ADIRFQ15847 76 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 SAPCD1Q5SSQ6 148 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 KCNIP4Q6PIL6 250 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 NFE4Q86UQ8 179 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 NHLRC2Q8NBF2 726 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 PTH2Q96A98 100 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 IMMP2LQ96T52 175 aa7.17□□□□□ -1.26
VRK3-214ENST00000598553 TGIF2-C20orf24A0A0A6YYL0 155 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 GRIFINA4D1Z8 144 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 H3BVH4 76 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 CIDEAO60543 219 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 CXCL1P09341 107 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 LINC00694P0DN24 101 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 EVI2AP22794 236 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 ERVFC1-1P60608 527 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 HAMPP81172 84 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 UFSP1Q6NVU6 142 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 MSRB1Q9NZV6 116 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 URGCP-MRPS24S4R325 110 aa7.16□□□□□ -1.26
VRK3-214ENST00000598553 TRBV6-4A0A1B0GX49 114 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 SH2D1AO60880 128 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 IGHV3-33P01772 117 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 S100A2P29034 98 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 XGP55808 180 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 WFDC2Q14508 124 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 RHOHQ15669 191 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 CST9LP1Q5W188 147 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 C14orf178Q8N769 122 aaPredicted RBP7.15□□□□□ -1.26
VRK3-214ENST00000598553 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.26
VRK3-214ENST00000598553 TMSB15BA0A087X1C1 80 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 EREGO14944 169 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 CRYGDP07320 174 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 MGST1P10620 155 aaKnown RBP7.14□□□□□ -1.27
VRK3-214ENST00000598553 NDUFA6P56556 154 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 DMRTA1Q5VZB9 504 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 Q8N1X5 172 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 C10orf126Q8N4M7 172 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 DNAJC30Q96LL9 226 aa7.14□□□□□ -1.27
VRK3-214ENST00000598553 TRAV9-1A0A075B6T8 112 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 IGHV3-38A0A0C4DH36 116 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 LRCOL1A6NCL2 159 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 GAGE12JA6NER3 117 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 FABP5P3A8MUU1 101 aa7.13□□□□□ -1.27
VRK3-214ENST00000598553 TRGC2P03986 189 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms