RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CNFNQ9BYD5 112 aa14.11□□□□□ -0.15
PNKP-211ENST00000598020 MUC21A0A0G2JKD1 596 aa14.1□□□□□ -0.15
PNKP-211ENST00000598020 MUC21A0A140T8X8 626 aa14.1□□□□□ -0.15
PNKP-211ENST00000598020 FOXA3P55318 350 aaPredicted RBP14.1□□□□□ -0.15
PNKP-211ENST00000598020 FAM3BP58499 235 aaPredicted RBP14.1□□□□□ -0.15
PNKP-211ENST00000598020 ADIRFQ15847 76 aa14.1□□□□□ -0.15
PNKP-211ENST00000598020 LYZL1Q6UWQ5 148 aa14.1□□□□□ -0.15
PNKP-211ENST00000598020 C15orf54Q8N8G6 183 aa14.1□□□□□ -0.15
PNKP-211ENST00000598020 TPPP3Q9BW30 176 aa14.1□□□□□ -0.15
PNKP-211ENST00000598020 VPS13DQ5THJ4 4388 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 K7EQD1 137 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 GYPEP15421 78 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 CCL18P55774 89 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 RHOHQ15669 191 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 GTSF1Q8WW33 167 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 PRADC1Q9BSG0 188 aa14.09□□□□□ -0.15
PNKP-211ENST00000598020 A0A087WWL8 130 aa14.08□□□□□ -0.16
PNKP-211ENST00000598020 FAM231BA6NCW3 169 aa14.08□□□□□ -0.16
PNKP-211ENST00000598020 Q6ZSN1 163 aa14.08□□□□□ -0.16
PNKP-211ENST00000598020 TSKUQ8WUA8 353 aa14.08□□□□□ -0.16
PNKP-211ENST00000598020 GFRA4Q9GZZ7 299 aa14.08□□□□□ -0.16
PNKP-211ENST00000598020 V9GYV3 84 aa14.08□□□□□ -0.16
PNKP-211ENST00000598020 FAM74A4Q5TZK3 123 aa14.07□□□□□ -0.16
PNKP-211ENST00000598020 UBE2DNLQ8IWF7 75 aa14.07□□□□□ -0.16
PNKP-211ENST00000598020 AP1S3Q96PC3 154 aa14.07□□□□□ -0.16
PNKP-211ENST00000598020 KIF25-AS1Q9Y6Z4 181 aa14.07□□□□□ -0.16
PNKP-211ENST00000598020 RYR2Q92736 4967 aa14.07□□□□□ -0.16
PNKP-211ENST00000598020 LINC00862A6NCI5 91 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 SRIP30626 198 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 ESRGQ1W209 222 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 NEGR1Q7Z3B1 354 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 SH2D6Q7Z4S9 175 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 OR10G8Q8NGN5 311 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 MSRB1Q9NZV6 116 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 LINC00588Q9Y4M8 146 aa14.06□□□□□ -0.16
PNKP-211ENST00000598020 NTF3P20783 257 aa14.05□□□□□ -0.16
PNKP-211ENST00000598020 LOC100131303A0A0U1RQF7 123 aa14.04□□□□□ -0.16
PNKP-211ENST00000598020 TRGC1P0CF51 173 aa14.04□□□□□ -0.16
PNKP-211ENST00000598020 LINC00315P59091 139 aa14.04□□□□□ -0.16
PNKP-211ENST00000598020 RAB4BP61018 213 aa14.04□□□□□ -0.16
PNKP-211ENST00000598020 SSTP61278 116 aa14.04□□□□□ -0.16
PNKP-211ENST00000598020 PNRC1Q12796 327 aaPredicted RBP14.04□□□□□ -0.16
PNKP-211ENST00000598020 COMMD7Q86VX2 200 aa14.04□□□□□ -0.16
PNKP-211ENST00000598020 C14orf178Q8N769 122 aaPredicted RBP14.04□□□□□ -0.16
PNKP-211ENST00000598020 TMEM218A2RU14 115 aa14.03□□□□□ -0.16
PNKP-211ENST00000598020 SMIM17P0DL12 118 aa14.03□□□□□ -0.16
PNKP-211ENST00000598020 UPK3BQ9BT76 320 aa14.03□□□□□ -0.16
PNKP-211ENST00000598020 RYR3Q15413 4870 aa14.03□□□□□ -0.16
PNKP-211ENST00000598020 TRBV10-1A0A0K0K1A3 114 aa14.02□□□□□ -0.17
PNKP-211ENST00000598020 TIRAPP58753 221 aa14.02□□□□□ -0.17
PNKP-211ENST00000598020 LYPD5Q6UWN5 251 aa14.02□□□□□ -0.17
PNKP-211ENST00000598020 PGLYRP4Q96LB8 373 aa14.02□□□□□ -0.17
PNKP-211ENST00000598020 MRPS16Q9Y3D3 137 aaKnown RBP14.02□□□□□ -0.17
PNKP-211ENST00000598020 HYDINQ4G0P3 5121 aa14.02□□□□□ -0.17
PNKP-211ENST00000598020 HIGD1CA8MV81 97 aa14.01□□□□□ -0.17
PNKP-211ENST00000598020 LINC00694P0DN24 101 aa14.01□□□□□ -0.17
PNKP-211ENST00000598020 TWIST1Q15672 202 aa14.01□□□□□ -0.17
PNKP-211ENST00000598020 ZNRF2Q8NHG8 242 aa14.01□□□□□ -0.17
PNKP-211ENST00000598020 EVI2AP22794 236 aa14□□□□□ -0.17
PNKP-211ENST00000598020 KMT2AQ03164 3969 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 SMIM27A0A1W2PRY6 76 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 ADCYAP1P18509 176 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 ZNF56Q15929 161 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 BORCS7Q96B45 105 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 DPH3P1Q9H4G8 78 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 Q9UF83 564 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 NAT8BQ9UHF3 227 aa13.99□□□□□ -0.17
PNKP-211ENST00000598020 A0A1B0GUT8 65 aa13.98□□□□□ -0.17
PNKP-211ENST00000598020 PPP1R2P9O14990 202 aa13.98□□□□□ -0.17
PNKP-211ENST00000598020 NUP35Q8NFH5 326 aa13.98□□□□□ -0.17
PNKP-211ENST00000598020 SEC11CQ9BY50 192 aa13.98□□□□□ -0.17
PNKP-211ENST00000598020 DNAH6Q9C0G6 4158 aa13.97□□□□□ -0.17
PNKP-211ENST00000598020 F5H697 171 aa13.97□□□□□ -0.17
PNKP-211ENST00000598020 ATP6V0E2Q8NHE4 81 aa13.97□□□□□ -0.17
PNKP-211ENST00000598020 GAGE12JA6NER3 117 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 F8W036 122 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 GAGE1Q13065 139 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 GAGE4Q13068 117 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 GAGE5Q13069 117 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 GAGE13Q4V321 117 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 Q9H8V8 135 aa13.96□□□□□ -0.17
PNKP-211ENST00000598020 TRBV7-3A0A075B6L6 115 aa13.95□□□□□ -0.18
PNKP-211ENST00000598020 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
PNKP-211ENST00000598020 RPL36AP83881 106 aaKnown RBP13.95□□□□□ -0.18
PNKP-211ENST00000598020 SMIM15Q7Z3B0 74 aa13.95□□□□□ -0.18
PNKP-211ENST00000598020 RPL36ALQ969Q0 106 aaKnown RBP13.95□□□□□ -0.18
PNKP-211ENST00000598020 ANAPC16Q96DE5 110 aa13.95□□□□□ -0.18
PNKP-211ENST00000598020 GTSF1LQ9H1H1 148 aa13.95□□□□□ -0.18
PNKP-211ENST00000598020 H7C1H1 209 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 M0QY20 66 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 MGPP08493 103 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 RIGQ13278 110 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 C10orf91Q5T1B1 145 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 SUMO4Q6EEV6 95 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 Q6ZR54 194 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 NEXN-AS1Q8NBZ9 246 aa13.94□□□□□ -0.18
PNKP-211ENST00000598020 UBE2D3P61077 147 aa13.93□□□□□ -0.18
PNKP-211ENST00000598020 UBE2D2P62837 147 aa13.93□□□□□ -0.18
PNKP-211ENST00000598020 DNAJC30Q96LL9 226 aa13.92□□□□□ -0.18
PNKP-211ENST00000598020 TMEM191AQ9H0A3 160 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms