RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 KLK5Q9Y337 293 aaPredicted RBP11.77□□□□□ -0.53
PDE4C-211ENST00000597360 F6UB75 175 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 M0R2P5 195 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 IGHG4P01861 327 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 LINC00694P0DN24 101 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 PF4V1P10720 104 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 RNASE13Q5GAN3 156 aaKnown RBP11.77□□□□□ -0.53
PDE4C-211ENST00000597360 EEF1AKMT3Q96AZ1 226 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 ODF3Q96PU9 254 aa11.77□□□□□ -0.53
PDE4C-211ENST00000597360 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
PDE4C-211ENST00000597360 CENPVL3A0A0U1RRI6 287 aa11.76□□□□□ -0.53
PDE4C-211ENST00000597360 OOSP1A8MZH6 123 aa11.76□□□□□ -0.53
PDE4C-211ENST00000597360 LINC01619G3V211 115 aa11.76□□□□□ -0.53
PDE4C-211ENST00000597360 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
PDE4C-211ENST00000597360 Q6ZSV7 163 aa11.76□□□□□ -0.53
PDE4C-211ENST00000597360 IGLV11-55A0A075B6I3 123 aa11.75□□□□□ -0.53
PDE4C-211ENST00000597360 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
PDE4C-211ENST00000597360 TRIAP1O43715 76 aa11.75□□□□□ -0.53
PDE4C-211ENST00000597360 THBDP07204 575 aa11.75□□□□□ -0.53
PDE4C-211ENST00000597360 SDHAF1A6NFY7 115 aa11.75□□□□□ -0.53
PDE4C-211ENST00000597360 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
PDE4C-211ENST00000597360 TNFRSF18Q9Y5U5 241 aa11.75□□□□□ -0.53
PDE4C-211ENST00000597360 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 CD3EP07766 207 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 ZZEF1O43149 2961 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
PDE4C-211ENST00000597360 UBE2E1P51965 193 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 DAND5Q8N907 189 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 ATMQ13315 3056 aa11.74□□□□□ -0.53
PDE4C-211ENST00000597360 LGALS9O00182 355 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 PRR9Q5T870 116 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 SMG1Q96Q15 3661 aaKnown RBP11.73□□□□□ -0.53
PDE4C-211ENST00000597360 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 MBD3L4A6NDZ8 208 aaPredicted RBP11.73□□□□□ -0.53
PDE4C-211ENST00000597360 MBD3L3A6NE82 208 aaPredicted RBP11.73□□□□□ -0.53
PDE4C-211ENST00000597360 MBD3L5A6NJ08 208 aaPredicted RBP11.73□□□□□ -0.53
PDE4C-211ENST00000597360 COX6B1P14854 86 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 MBD3L2Q8NHZ7 208 aaPredicted RBP11.73□□□□□ -0.53
PDE4C-211ENST00000597360 FAM215AQ9Y5M1 114 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 G3V318 75 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 BUB3O43684 328 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 ZNF580Q9UK33 172 aa11.73□□□□□ -0.53
PDE4C-211ENST00000597360 ZNRF2Q8NHG8 242 aa11.72□□□□□ -0.53
PDE4C-211ENST00000597360 TMEM190Q8WZ59 177 aa11.72□□□□□ -0.53
PDE4C-211ENST00000597360 ZNF625Q96I27 306 aaPredicted RBP11.72□□□□□ -0.53
PDE4C-211ENST00000597360 MSRB2Q9Y3D2 182 aa11.72□□□□□ -0.53
PDE4C-211ENST00000597360 VCYO14598 125 aa11.72□□□□□ -0.53
PDE4C-211ENST00000597360 LINC00477Q96M19 166 aa11.72□□□□□ -0.53
PDE4C-211ENST00000597360 LINC01546A6NGU7 62 aa11.71□□□□□ -0.54
PDE4C-211ENST00000597360 C8orf31Q8N9H6 132 aa11.71□□□□□ -0.54
PDE4C-211ENST00000597360 TMEM126AQ9H061 195 aa11.71□□□□□ -0.54
PDE4C-211ENST00000597360 PPP1R17O96001 155 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 CRYGDP07320 174 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 ICOSQ9Y6W8 199 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 SPG11Q96JI7 2443 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 CSMD1Q96PZ7 3565 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 ZNF575Q86XF7 245 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
PDE4C-211ENST00000597360 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
PDE4C-211ENST00000597360 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
PDE4C-211ENST00000597360 SBSPONQ8IVN8 264 aa11.69□□□□□ -0.54
PDE4C-211ENST00000597360 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
PDE4C-211ENST00000597360 F8W735 103 aaPredicted RBP11.69□□□□□ -0.54
PDE4C-211ENST00000597360 NPFFO15130 113 aa11.69□□□□□ -0.54
PDE4C-211ENST00000597360 GAGE2AQ6NT46 116 aa11.69□□□□□ -0.54
PDE4C-211ENST00000597360 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
PDE4C-211ENST00000597360 HERVK_113P63121 156 aa11.68□□□□□ -0.54
PDE4C-211ENST00000597360 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
PDE4C-211ENST00000597360 PTPRQQ9UMZ3 2332 aa11.68□□□□□ -0.54
PDE4C-211ENST00000597360 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
PDE4C-211ENST00000597360 H7C423 109 aa11.68□□□□□ -0.54
PDE4C-211ENST00000597360 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
PDE4C-211ENST00000597360 RNF5Q99942 180 aa11.68□□□□□ -0.54
PDE4C-211ENST00000597360 A8MZ25 164 aa11.67□□□□□ -0.54
PDE4C-211ENST00000597360 CD28P10747 220 aa11.67□□□□□ -0.54
PDE4C-211ENST00000597360 TSHBP01222 138 aa11.67□□□□□ -0.54
PDE4C-211ENST00000597360 ZNF876PQ49A33 203 aa11.67□□□□□ -0.54
PDE4C-211ENST00000597360 SUMO4Q6EEV6 95 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 NUP37Q8NFH4 326 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 SPTBN4Q9H254 2564 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 E7EQL1 145 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 Q6Q795 121 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 COX8CQ7Z4L0 72 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 TMEM141Q96I45 108 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 NDUFA12Q9UI09 145 aa11.66□□□□□ -0.54
PDE4C-211ENST00000597360 TLN1Q9Y490 2541 aaKnown RBP11.65□□□□□ -0.54
PDE4C-211ENST00000597360 SPANXA1Q9NS26 97 aa11.65□□□□□ -0.54
PDE4C-211ENST00000597360 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.54
PDE4C-211ENST00000597360 LEPROTO15243 131 aa11.65□□□□□ -0.54
PDE4C-211ENST00000597360 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
PDE4C-211ENST00000597360 LINC01560Q8TB33 94 aa11.65□□□□□ -0.54
PDE4C-211ENST00000597360 IGHV3OR16-10A0A075B7F0 116 aa11.64□□□□□ -0.55
PDE4C-211ENST00000597360 A0A0B4J2C4 111 aa11.64□□□□□ -0.55
PDE4C-211ENST00000597360 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
PDE4C-211ENST00000597360 P0DMU3 169 aa11.64□□□□□ -0.55
PDE4C-211ENST00000597360 FAM231AP0DMU4 169 aa11.64□□□□□ -0.55
PDE4C-211ENST00000597360 FAM231CP0DMU5 169 aa11.64□□□□□ -0.55
PDE4C-211ENST00000597360 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
PDE4C-211ENST00000597360 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms