RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 MED28Q9H204 178 aa10.54□□□□□ -0.72
LIM2-202ENST00000596399 A0A087WWC5 75 aa10.53□□□□□ -0.72
LIM2-202ENST00000596399 CTXND1A0A1B0GTU2 59 aa10.53□□□□□ -0.72
LIM2-202ENST00000596399 RBFOX3A6NFN3 312 aa10.53□□□□□ -0.72
LIM2-202ENST00000596399 M0R381 172 aa10.53□□□□□ -0.72
LIM2-202ENST00000596399 TOR2AQ5JU69 321 aa10.53□□□□□ -0.72
LIM2-202ENST00000596399 FAT3Q8TDW7 4589 aa10.53□□□□□ -0.72
LIM2-202ENST00000596399 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.72
LIM2-202ENST00000596399 KRTAP29-1A8MX34 341 aaPredicted RBP10.52□□□□□ -0.73
LIM2-202ENST00000596399 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
LIM2-202ENST00000596399 OR11H4Q8NGC9 324 aa10.52□□□□□ -0.73
LIM2-202ENST00000596399 UBE2WQ96B02 151 aa10.52□□□□□ -0.73
LIM2-202ENST00000596399 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
LIM2-202ENST00000596399 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
LIM2-202ENST00000596399 FXYD6-FXYD2A0A087WZ82 144 aa10.51□□□□□ -0.73
LIM2-202ENST00000596399 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
LIM2-202ENST00000596399 SYT8Q8NBV8 401 aa10.51□□□□□ -0.73
LIM2-202ENST00000596399 INO80EQ8NBZ0 244 aaPredicted RBP10.51□□□□□ -0.73
LIM2-202ENST00000596399 RHODO00212 210 aa10.5□□□□□ -0.73
LIM2-202ENST00000596399 FAM162BQ5T6X4 162 aa10.5□□□□□ -0.73
LIM2-202ENST00000596399 Q8N976 141 aa10.5□□□□□ -0.73
LIM2-202ENST00000596399 HIST1H2BAQ96A08 127 aa10.5□□□□□ -0.73
LIM2-202ENST00000596399 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
LIM2-202ENST00000596399 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
LIM2-202ENST00000596399 A0A087WX48 190 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 BORCS7-ASMTA0A0B4J1R7 106 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 GIPP09681 153 aaPredicted RBP10.49□□□□□ -0.73
LIM2-202ENST00000596399 ZNF674Q2M3X9 581 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 RMI2Q96E14 147 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 CHAC1Q9BUX1 264 aa10.49□□□□□ -0.73
LIM2-202ENST00000596399 TPT1P13693 172 aaKnown RBP10.48□□□□□ -0.73
LIM2-202ENST00000596399 UBE2D3P61077 147 aa10.48□□□□□ -0.73
LIM2-202ENST00000596399 UBE2D2P62837 147 aa10.48□□□□□ -0.73
LIM2-202ENST00000596399 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
LIM2-202ENST00000596399 ZFP30Q9Y2G7 519 aa10.48□□□□□ -0.73
LIM2-202ENST00000596399 MAP1LC3B2A6NCE7 125 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 PTTG1O95997 202 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 FHITP49789 147 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 UBE2G1P62253 170 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 AKR1C8PQ5T2L2 129 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 ENHOQ6UWT2 76 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 FMC1Q96HJ9 113 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 MAP1LC3BQ9GZQ8 125 aa10.47□□□□□ -0.73
LIM2-202ENST00000596399 TMEM262E9PQX1 116 aa10.46□□□□□ -0.73
LIM2-202ENST00000596399 G3V3Q6 166 aa10.46□□□□□ -0.73
LIM2-202ENST00000596399 LTAP01374 205 aa10.46□□□□□ -0.73
LIM2-202ENST00000596399 RPL36AP83881 106 aaKnown RBP10.46□□□□□ -0.73
LIM2-202ENST00000596399 RPL19P84098 196 aaKnown RBP10.46□□□□□ -0.73
LIM2-202ENST00000596399 ATRAIDQ6UW56 229 aa10.46□□□□□ -0.73
LIM2-202ENST00000596399 ZFP82Q8N141 532 aa10.46□□□□□ -0.73
LIM2-202ENST00000596399 RPL36ALQ969Q0 106 aaKnown RBP10.46□□□□□ -0.73
LIM2-202ENST00000596399 NKX6-2Q9C056 277 aaPredicted RBP10.46□□□□□ -0.73
LIM2-202ENST00000596399 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.73
LIM2-202ENST00000596399 TRBV7-3A0A075B6L6 115 aa10.45□□□□□ -0.74
LIM2-202ENST00000596399 MUC21A0A0G2JKD1 596 aa10.45□□□□□ -0.74
LIM2-202ENST00000596399 MUC21A0A140T8X8 626 aa10.45□□□□□ -0.74
LIM2-202ENST00000596399 CST9LP1Q5W188 147 aa10.45□□□□□ -0.74
LIM2-202ENST00000596399 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
LIM2-202ENST00000596399 MPV17L2Q567V2 206 aa10.44□□□□□ -0.74
LIM2-202ENST00000596399 C15orf54Q8N8G6 183 aa10.44□□□□□ -0.74
LIM2-202ENST00000596399 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
LIM2-202ENST00000596399 OR10AG1Q8NH19 301 aa10.44□□□□□ -0.74
LIM2-202ENST00000596399 PKHD1L1Q86WI1 4243 aa10.44□□□□□ -0.74
LIM2-202ENST00000596399 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 TRBV6-1A0A0K0K1D8 114 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 IGLV2-8P01709 118 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 SEC11BP0C7V7 166 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 SSTP61278 116 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 ELOBQ15370 118 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 ZNF56Q15929 161 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 KCNIP4Q6PIL6 250 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 OR10G8Q8NGN5 311 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 CHCHD7Q9BUK0 85 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
LIM2-202ENST00000596399 A0A1B0GV50 99 aa10.42□□□□□ -0.74
LIM2-202ENST00000596399 ARPC5O15511 151 aa10.42□□□□□ -0.74
LIM2-202ENST00000596399 PAGE4O60829 102 aa10.42□□□□□ -0.74
LIM2-202ENST00000596399 AKR1C3P42330 323 aa10.42□□□□□ -0.74
LIM2-202ENST00000596399 Q0VG73 95 aa10.42□□□□□ -0.74
LIM2-202ENST00000596399 SMLR1H3BR10 107 aa10.41□□□□□ -0.74
LIM2-202ENST00000596399 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
LIM2-202ENST00000596399 RAB4BP61018 213 aa10.41□□□□□ -0.74
LIM2-202ENST00000596399 PRR27Q6MZM9 219 aa10.41□□□□□ -0.74
LIM2-202ENST00000596399 SCO2A0A1W2PP80 73 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 USP17L23D6RBM5 183 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 HLA-DQA1P01909 254 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 CLPSL2Q6UWE3 100 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 STOML3Q8TAV4 291 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
LIM2-202ENST00000596399 CRPP02741 224 aa10.39□□□□□ -0.75
LIM2-202ENST00000596399 PRSS1P07477 247 aa10.39□□□□□ -0.75
LIM2-202ENST00000596399 HNRNPA3P51991 378 aaKnown RBP10.39□□□□□ -0.75
LIM2-202ENST00000596399 F5H697 171 aa10.38□□□□□ -0.75
LIM2-202ENST00000596399 PANO1I0J062 215 aa10.38□□□□□ -0.75
LIM2-202ENST00000596399 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
LIM2-202ENST00000596399 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms