RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.3
SHKBP1-210ENST00000595874 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 A0A0D9SG52 128 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 SEC11BP0C7V7 166 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 GZMBP10144 247 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 XGP55808 180 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 ZNF56Q15929 161 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 ZNF674Q2M3X9 581 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 C10orf126Q8N4M7 172 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 OR10AG1Q8NH19 301 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 MBD3L1Q8WWY6 194 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 NKX6-2Q9C056 277 aaPredicted RBP6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
SHKBP1-210ENST00000595874 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 C1QBP02746 253 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 GCSHP23434 173 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 ZNF345Q14585 488 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 LINC01620Q4KN68 170 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 PTH2Q96A98 100 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
SHKBP1-210ENST00000595874 RAB19A4D1S5 217 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 HMSDA8MTL9 139 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 CIDEAO60543 219 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 TIRAPP58753 221 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 ZFP2Q6ZN57 461 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 ZFP82Q8N141 532 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 BAALCQ8WXS3 180 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 KLK12Q9UKR0 248 aa6.87□□□□□ -1.31
SHKBP1-210ENST00000595874 IGKV2D-24A0A075B6R9 120 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 TRBV6-1A0A0K0K1D8 114 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 EPM2AB3EWF7 344 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 UMAD1C9J7I0 102 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 F5H697 171 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 MGPP08493 103 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 RPL35P42766 123 aaKnown RBP6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 SPANXN1Q5VSR9 72 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 Q8N814 137 aa6.86□□□□□ -1.31
SHKBP1-210ENST00000595874 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
SHKBP1-210ENST00000595874 RHODO00212 210 aa6.85□□□□□ -1.31
SHKBP1-210ENST00000595874 CENPWQ5EE01 88 aa6.85□□□□□ -1.31
SHKBP1-210ENST00000595874 DNLZQ5SXM8 178 aa6.85□□□□□ -1.31
SHKBP1-210ENST00000595874 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
SHKBP1-210ENST00000595874 URGCP-MRPS24S4R325 110 aa6.85□□□□□ -1.31
SHKBP1-210ENST00000595874 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 EIF5AP63241 154 aaKnown RBP6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 RPL36AP83881 106 aaKnown RBP6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 Q5VSD8 79 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 COX8CQ7Z4L0 72 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 RPL36ALQ969Q0 106 aaKnown RBP6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 UBE2WQ96B02 151 aa6.84□□□□□ -1.31
SHKBP1-210ENST00000595874 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 UBE2D3P61077 147 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 UBE2D2P62837 147 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 NIT1Q86X76 327 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 OR2D3Q8NGH3 330 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 DAZAP1Q96EP5 407 aaKnown RBP6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 TCEAL7Q9BRU2 100 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 MED9Q9NWA0 146 aa6.83□□□□□ -1.32
SHKBP1-210ENST00000595874 A0A087WX48 190 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 K7EP13 123 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 IGLV2-8P01709 118 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 INAFM2P0DMQ5 153 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 GAGE6Q13070 117 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 PIK3CD-AS1Q5SR53 167 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 CHCHD5Q9BSY4 110 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 TM2D2Q9BX73 214 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 MANBALQ9NQG1 85 aa6.82□□□□□ -1.32
SHKBP1-210ENST00000595874 TRBV7-3A0A075B6L6 115 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 A0A087WWC5 75 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 SNAI2O43623 268 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 SMIM17P0DL12 118 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 SULT1A2P50226 295 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 RAB4BP61018 213 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 KCNIP4Q6PIL6 250 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 FRZBQ92765 325 aa6.81□□□□□ -1.32
SHKBP1-210ENST00000595874 ANGP03950 147 aaKnown RBP6.8□□□□□ -1.32
SHKBP1-210ENST00000595874 GNG4P50150 75 aa6.8□□□□□ -1.32
SHKBP1-210ENST00000595874 CEBPGP53567 150 aa6.8□□□□□ -1.32
SHKBP1-210ENST00000595874 LAGE3Q14657 143 aa6.8□□□□□ -1.32
SHKBP1-210ENST00000595874 Q8N976 141 aa6.8□□□□□ -1.32
SHKBP1-210ENST00000595874 FER1L6-AS1Q8NA97 138 aa6.8□□□□□ -1.32
SHKBP1-210ENST00000595874 TRBV20OR9-2A0A075B6H5 130 aa6.79□□□□□ -1.32
SHKBP1-210ENST00000595874 IFNA1P01562 189 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms