RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 SPINK8P0C7L1 97 aa12.34□□□□□ -0.43
SIN3B-206ENST00000595541 SRD5A1P18405 259 aa12.34□□□□□ -0.43
SIN3B-206ENST00000595541 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
SIN3B-206ENST00000595541 POLR2KP53803 58 aaKnown RBP12.34□□□□□ -0.43
SIN3B-206ENST00000595541 K7ENP7 123 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
SIN3B-206ENST00000595541 ABCA2Q9BZC7 2435 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 OVOL1O14753 267 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 GATA3P23771 443 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 Q6ZUT4 128 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 KIR2DL4Q99706 377 aa12.33□□□□□ -0.44
SIN3B-206ENST00000595541 NPFFO15130 113 aa12.32□□□□□ -0.44
SIN3B-206ENST00000595541 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
SIN3B-206ENST00000595541 LMO4P61968 165 aa12.32□□□□□ -0.44
SIN3B-206ENST00000595541 PMVKQ15126 192 aa12.32□□□□□ -0.44
SIN3B-206ENST00000595541 TMEM170BQ5T4T1 132 aa12.32□□□□□ -0.44
SIN3B-206ENST00000595541 APRG1Q8IVJ8 170 aa12.31□□□□□ -0.44
SIN3B-206ENST00000595541 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
SIN3B-206ENST00000595541 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
SIN3B-206ENST00000595541 A0A087WW49 117 aa12.31□□□□□ -0.44
SIN3B-206ENST00000595541 TEN1Q86WV5 123 aa12.31□□□□□ -0.44
SIN3B-206ENST00000595541 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
SIN3B-206ENST00000595541 BPESC1Q9GZL8 116 aa12.3□□□□□ -0.44
SIN3B-206ENST00000595541 NXPH4O95158 308 aa12.3□□□□□ -0.44
SIN3B-206ENST00000595541 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
SIN3B-206ENST00000595541 BRD3OSQ6XYD6 125 aa12.3□□□□□ -0.44
SIN3B-206ENST00000595541 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
SIN3B-206ENST00000595541 HIVEP3Q5T1R4 2406 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 SBSPONQ8IVN8 264 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 PPDPFLQ8WWR9 84 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 IGHV1-69DA0A0B4J2H0 117 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 SDHAF1A6NFY7 115 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 FOXC1Q12948 553 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 RAX2Q96IS3 184 aa12.29□□□□□ -0.44
SIN3B-206ENST00000595541 CELSR2Q9HCU4 2923 aa12.28□□□□□ -0.44
SIN3B-206ENST00000595541 F5H697 171 aa12.28□□□□□ -0.44
SIN3B-206ENST00000595541 NDUFA4O00483 81 aa12.28□□□□□ -0.44
SIN3B-206ENST00000595541 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
SIN3B-206ENST00000595541 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
SIN3B-206ENST00000595541 J3QQQ9 107 aa12.27□□□□□ -0.44
SIN3B-206ENST00000595541 TRPT1Q86TN4 253 aaKnown RBP12.27□□□□□ -0.44
SIN3B-206ENST00000595541 RHPN1-AS1Q9BWJ2 59 aa12.27□□□□□ -0.44
SIN3B-206ENST00000595541 ZNF580Q9UK33 172 aa12.27□□□□□ -0.44
SIN3B-206ENST00000595541 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.44
SIN3B-206ENST00000595541 IGHV3-64A0A075B6Q5 118 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 PPP1R17O96001 155 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 HERVK_113P61574 105 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 PRO1854Q9UHT4 67 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 MOB4Q9Y3A3 225 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 SORL1Q92673 2214 aa12.27□□□□□ -0.45
SIN3B-206ENST00000595541 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
SIN3B-206ENST00000595541 A4D1N5 150 aa12.26□□□□□ -0.45
SIN3B-206ENST00000595541 ELANEP08246 267 aa12.26□□□□□ -0.45
SIN3B-206ENST00000595541 UBTD1Q9HAC8 227 aa12.26□□□□□ -0.45
SIN3B-206ENST00000595541 KLLNB2CW77 178 aa12.26□□□□□ -0.45
SIN3B-206ENST00000595541 VCYO14598 125 aa12.26□□□□□ -0.45
SIN3B-206ENST00000595541 A8MWV9 139 aa12.25□□□□□ -0.45
SIN3B-206ENST00000595541 SCGB1C2P0DMR2 95 aa12.25□□□□□ -0.45
SIN3B-206ENST00000595541 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
SIN3B-206ENST00000595541 LY6EQ16553 131 aa12.25□□□□□ -0.45
SIN3B-206ENST00000595541 RNF183Q96D59 192 aa12.25□□□□□ -0.45
SIN3B-206ENST00000595541 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
SIN3B-206ENST00000595541 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
SIN3B-206ENST00000595541 H7C2G1 150 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 P0DMU3 169 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 FAM159AQ6UWV7 190 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 TMEM141Q96I45 108 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 MDFICQ9P1T7 246 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 TRBV27A0A0K0K1C4 114 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 TRBV20-1A0A075B6N2 111 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 HERV-K104P63124 156 aa12.24□□□□□ -0.45
SIN3B-206ENST00000595541 ZNF688P0C7X2 276 aa12.23□□□□□ -0.45
SIN3B-206ENST00000595541 BLCAPP62952 87 aa12.23□□□□□ -0.45
SIN3B-206ENST00000595541 IGHV3-33P01772 117 aa12.23□□□□□ -0.45
SIN3B-206ENST00000595541 TRAV12-2A0A075B6T6 113 aa12.22□□□□□ -0.45
SIN3B-206ENST00000595541 C9JAW5 83 aa12.22□□□□□ -0.45
SIN3B-206ENST00000595541 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
SIN3B-206ENST00000595541 TRAV2A0A0B4J234 112 aa12.22□□□□□ -0.45
SIN3B-206ENST00000595541 IGKV3-20P01619 116 aa12.22□□□□□ -0.45
SIN3B-206ENST00000595541 PF4V1P10720 104 aa12.22□□□□□ -0.45
SIN3B-206ENST00000595541 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
SIN3B-206ENST00000595541 MUSTN1Q8IVN3 82 aa12.22□□□□□ -0.45
SIN3B-206ENST00000595541 TMEM223A0PJW6 202 aa12.21□□□□□ -0.45
SIN3B-206ENST00000595541 LGALS9O00182 355 aa12.21□□□□□ -0.45
SIN3B-206ENST00000595541 SLC25A20O43772 301 aa12.21□□□□□ -0.45
SIN3B-206ENST00000595541 M0QY20 66 aa12.21□□□□□ -0.46
SIN3B-206ENST00000595541 LYRM7Q5U5X0 104 aa12.21□□□□□ -0.46
SIN3B-206ENST00000595541 TRBV7-9A0A0J9YWB2 115 aa12.2□□□□□ -0.46
SIN3B-206ENST00000595541 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
SIN3B-206ENST00000595541 ADARB2-AS1A8MUL3 147 aa12.2□□□□□ -0.46
SIN3B-206ENST00000595541 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
SIN3B-206ENST00000595541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.2□□□□□ -0.462e-7■■■■■ 26.9
SIN3B-206ENST00000595541 TRBV6-5A0A0K0K1A5 114 aa12.19□□□□□ -0.46
SIN3B-206ENST00000595541 ZNF22P17026 224 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms