RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 TNFSF18Q9UNG2 199 aa6.94□□□□□ -1.3
USE1-203ENST00000593597 G3V3Q6 166 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 MBP02144 154 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 HNRNPA3P51991 378 aaKnown RBP6.93□□□□□ -1.3
USE1-203ENST00000593597 DEFA1P59665 94 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 DEFA3P59666 94 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 FAM74A4Q5TZK3 123 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 DEFB104AQ8WTQ1 72 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 CHAC1Q9BUX1 264 aa6.93□□□□□ -1.3
USE1-203ENST00000593597 IGKV2D-24A0A075B6R9 120 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 A0A087WWC5 75 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 TMSB15BA0A087X1C1 80 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 CTXND1A0A1B0GTU2 59 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 RBFOX3A6NFN3 312 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 RHODO00212 210 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 UBE2D3P61077 147 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 UBE2D2P62837 147 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 UBE2WQ96B02 151 aa6.92□□□□□ -1.3
USE1-203ENST00000593597 M0R381 172 aa6.91□□□□□ -1.3
USE1-203ENST00000593597 ZNF674Q2M3X9 581 aa6.91□□□□□ -1.3
USE1-203ENST00000593597 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
USE1-203ENST00000593597 OR11H4Q8NGC9 324 aa6.91□□□□□ -1.3
USE1-203ENST00000593597 PANO1I0J062 215 aa6.9□□□□□ -1.3
USE1-203ENST00000593597 IFNA7P01567 189 aa6.9□□□□□ -1.3
USE1-203ENST00000593597 MPV17L2Q567V2 206 aa6.9□□□□□ -1.3
USE1-203ENST00000593597 Q8N976 141 aa6.9□□□□□ -1.3
USE1-203ENST00000593597 CYTL1Q9NRR1 136 aa6.9□□□□□ -1.3
USE1-203ENST00000593597 COX11Q9Y6N1 276 aa6.9□□□□□ -1.3
USE1-203ENST00000593597 TNXBP22105 4242 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 TRBV6-1A0A0K0K1D8 114 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 LTAP01374 205 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 GIPP09681 153 aaPredicted RBP6.89□□□□□ -1.31
USE1-203ENST00000593597 RPL19P84098 196 aaKnown RBP6.89□□□□□ -1.31
USE1-203ENST00000593597 FAM162BQ5T6X4 162 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 PRR27Q6MZM9 219 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 OR10G8Q8NGN5 311 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 HIST1H2BAQ96A08 127 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 RMI2Q96E14 147 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 CHCHD7Q9BUK0 85 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 MED28Q9H204 178 aa6.89□□□□□ -1.31
USE1-203ENST00000593597 FXYD6-FXYD2A0A087WZ82 144 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 TRBV10-1A0A0K0K1A3 114 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 IGLV2-8P01709 118 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 TPT1P13693 172 aaKnown RBP6.88□□□□□ -1.31
USE1-203ENST00000593597 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 OR10AG1Q8NH19 301 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 DAZAP1Q96EP5 407 aaKnown RBP6.88□□□□□ -1.31
USE1-203ENST00000593597 FMC1Q96HJ9 113 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 ZFP30Q9Y2G7 519 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 URGCP-MRPS24S4R325 110 aa6.88□□□□□ -1.31
USE1-203ENST00000593597 TRBV7-3A0A075B6L6 115 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 A0A087WX48 190 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 PTTG1O95997 202 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 FHITP49789 147 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
USE1-203ENST00000593597 ZFP82Q8N141 532 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 C15orf54Q8N8G6 183 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
USE1-203ENST00000593597 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
USE1-203ENST00000593597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.87□□□□□ -1.31
USE1-203ENST00000593597 LRP2P98164 4655 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 MUC21A0A0G2JKD1 596 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 MUC21A0A140T8X8 626 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 OXTP01178 125 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 PRSS1P07477 247 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 KIF25-AS1Q9Y6Z4 181 aa6.86□□□□□ -1.31
USE1-203ENST00000593597 BORCS7-ASMTA0A0B4J1R7 106 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 SNAI2O43623 268 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 MT1HL1P0DM35 61 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 RAB4BP61018 213 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 UBE2G1P62253 170 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 Q0VG73 95 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 ZNF56Q15929 161 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 AKR1C8PQ5T2L2 129 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 SERTAD4-AS1Q5TG53 156 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
USE1-203ENST00000593597 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 C1orf43Q9BWL3 253 aa6.85□□□□□ -1.31
USE1-203ENST00000593597 NKX6-2Q9C056 277 aaPredicted RBP6.85□□□□□ -1.31
USE1-203ENST00000593597 SCO2A0A1W2PP80 73 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 PAGE4O60829 102 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 HLA-DQA1P01909 254 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 ANGP03950 147 aaKnown RBP6.84□□□□□ -1.31
USE1-203ENST00000593597 CXCL1P09341 107 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 SEC11BP0C7V7 166 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 AKR1C3P42330 323 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 RPL37AP61513 92 aaKnown RBP6.84□□□□□ -1.31
USE1-203ENST00000593597 ELOBQ15370 118 aa6.84□□□□□ -1.31
USE1-203ENST00000593597 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms