RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 A0A087WX48 190 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 RHODO00212 210 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 IFNA7P01567 189 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 CRIP1P50238 77 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 UBE2G2P60604 165 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 Q86TA4 180 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 OR11H4Q8NGC9 324 aa11.38□□□□□ -0.59
RETREG3-212ENST00000593251 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 KRBOX1C9JBD0 128 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 OXTP01178 125 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 IGLV2-8P01709 118 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 SEC11BP0C7V7 166 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 ZC2HC1AQ96GY0 325 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
RETREG3-212ENST00000593251 PEX7O00628 323 aa11.36□□□□□ -0.59
RETREG3-212ENST00000593251 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
RETREG3-212ENST00000593251 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
RETREG3-212ENST00000593251 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 M0R381 172 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 SH2D1AO60880 128 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 DNLZQ5SXM8 178 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 KCNIP4Q6PIL6 250 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 AQP10Q96PS8 301 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 ALG5Q9Y673 324 aa11.35□□□□□ -0.59
RETREG3-212ENST00000593251 ELOBQ15370 118 aa11.34□□□□□ -0.59
RETREG3-212ENST00000593251 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
RETREG3-212ENST00000593251 PLA2G2DQ9UNK4 145 aa11.34□□□□□ -0.59
RETREG3-212ENST00000593251 PHLDA3Q9Y5J5 127 aa11.34□□□□□ -0.59
RETREG3-212ENST00000593251 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
RETREG3-212ENST00000593251 UBE2D3P61077 147 aa11.33□□□□□ -0.6
RETREG3-212ENST00000593251 UBE2D2P62837 147 aa11.33□□□□□ -0.6
RETREG3-212ENST00000593251 RPL36AP83881 106 aaKnown RBP11.33□□□□□ -0.6
RETREG3-212ENST00000593251 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
RETREG3-212ENST00000593251 RPL36ALQ969Q0 106 aaKnown RBP11.33□□□□□ -0.6
RETREG3-212ENST00000593251 C1orf43Q9BWL3 253 aa11.33□□□□□ -0.6
RETREG3-212ENST00000593251 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
RETREG3-212ENST00000593251 TPT1P13693 172 aaKnown RBP11.32□□□□□ -0.6
RETREG3-212ENST00000593251 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
RETREG3-212ENST00000593251 RPL37AP61513 92 aaKnown RBP11.32□□□□□ -0.6
RETREG3-212ENST00000593251 Q0VG73 95 aa11.32□□□□□ -0.6
RETREG3-212ENST00000593251 Q5BKY6 102 aa11.32□□□□□ -0.6
RETREG3-212ENST00000593251 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
RETREG3-212ENST00000593251 C15orf54Q8N8G6 183 aa11.32□□□□□ -0.6
RETREG3-212ENST00000593251 NKX6-2Q9C056 277 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-212ENST00000593251 TRBV7-3A0A075B6L6 115 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 BORCS7-ASMTA0A0B4J1R7 106 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 A6NHS1 94 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 C14orf177Q52M58 125 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 MED28Q9H204 178 aa11.31□□□□□ -0.6
RETREG3-212ENST00000593251 TRBV10-1A0A0K0K1A3 114 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 HLA-DQA1P01909 254 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 CRPP02741 224 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 MPV17L2Q567V2 206 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 INO80EQ8NBZ0 244 aaPredicted RBP11.3□□□□□ -0.6
RETREG3-212ENST00000593251 ZFP30Q9Y2G7 519 aa11.3□□□□□ -0.6
RETREG3-212ENST00000593251 TRBV6-8A0A0A6YYG3 113 aa11.29□□□□□ -0.6
RETREG3-212ENST00000593251 ANGP03950 147 aaKnown RBP11.29□□□□□ -0.6
RETREG3-212ENST00000593251 UBE2G1P62253 170 aa11.29□□□□□ -0.6
RETREG3-212ENST00000593251 ZNF674Q2M3X9 581 aa11.29□□□□□ -0.6
RETREG3-212ENST00000593251 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
RETREG3-212ENST00000593251 COX8CQ7Z4L0 72 aa11.29□□□□□ -0.6
RETREG3-212ENST00000593251 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
RETREG3-212ENST00000593251 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
RETREG3-212ENST00000593251 FMC1Q96HJ9 113 aa11.28□□□□□ -0.6
RETREG3-212ENST00000593251 PTTG1O95997 202 aa11.27□□□□□ -0.61
RETREG3-212ENST00000593251 PRSS1P07477 247 aa11.27□□□□□ -0.61
RETREG3-212ENST00000593251 ZNF56Q15929 161 aa11.27□□□□□ -0.61
RETREG3-212ENST00000593251 OR10G8Q8NGN5 311 aa11.27□□□□□ -0.61
RETREG3-212ENST00000593251 AKR1C8PQ5T2L2 129 aa11.26□□□□□ -0.61
RETREG3-212ENST00000593251 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
RETREG3-212ENST00000593251 CHCHD5Q9BSY4 110 aa11.26□□□□□ -0.61
RETREG3-212ENST00000593251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.26□□□□□ -0.61
RETREG3-212ENST00000593251 FXYD6-FXYD2A0A087WZ82 144 aa11.25□□□□□ -0.61
RETREG3-212ENST00000593251 PANO1I0J062 215 aa11.25□□□□□ -0.61
RETREG3-212ENST00000593251 LTAP01374 205 aa11.25□□□□□ -0.61
RETREG3-212ENST00000593251 RAB4BP61018 213 aa11.25□□□□□ -0.61
RETREG3-212ENST00000593251 RPL19P84098 196 aaKnown RBP11.25□□□□□ -0.61
RETREG3-212ENST00000593251 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
RETREG3-212ENST00000593251 MUC21A0A0G2JKD1 596 aa11.24□□□□□ -0.61
RETREG3-212ENST00000593251 MUC21A0A140T8X8 626 aa11.24□□□□□ -0.61
RETREG3-212ENST00000593251 MAP1LC3B2A6NCE7 125 aa11.24□□□□□ -0.61
RETREG3-212ENST00000593251 GIPP09681 153 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-212ENST00000593251 CST9LP1Q5W188 147 aa11.24□□□□□ -0.61
RETREG3-212ENST00000593251 MAP1LC3BQ9GZQ8 125 aa11.24□□□□□ -0.61
RETREG3-212ENST00000593251 TRBV6-1A0A0K0K1D8 114 aa11.23□□□□□ -0.61
RETREG3-212ENST00000593251 AKR1C3P42330 323 aa11.23□□□□□ -0.61
RETREG3-212ENST00000593251 MIAQ16674 131 aa11.23□□□□□ -0.61
RETREG3-212ENST00000593251 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
RETREG3-212ENST00000593251 NTM-AS1Q6ZSK4 140 aa11.23□□□□□ -0.61
RETREG3-212ENST00000593251 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
RETREG3-212ENST00000593251 SSTP61278 116 aa11.22□□□□□ -0.61
RETREG3-212ENST00000593251 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
RETREG3-212ENST00000593251 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
RETREG3-212ENST00000593251 TCEAL7Q9BRU2 100 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms