RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	CCDC140	Q96MF4	163 aa		10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE2D	Q9UEU5	116 aa		10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	PHLDA3	Q9Y5J5	127 aa		10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	OOSP1	A8MZH6	123 aa		10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	PPP1R17	O96001	155 aa		10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	S100A4	P26447	101 aa	Known RBP	10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	TP53TG1	Q9Y2A0	90 aa		10.89	□□□□□ -0.67
RFX2-222	ENST00000592546	TRAV4	A0A0B4J268	109 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546		J3KRW8	73 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	EIF4EBP3	O60516	100 aa	Predicted RBP	10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	CLEC19A	Q6UXS0	136 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	TRPT1	Q86TN4	253 aa	Known RBP	10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	ZFAND2A	Q8N6M9	145 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	METTL26	Q96S19	204 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	SNCG	O76070	127 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	IGHV3-33	P01772	117 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	ECSCR	Q19T08	205 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	KLK9	Q2XQG4	91 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	RAX2	Q96IS3	184 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	KLK9	Q9UKQ9	250 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546		U3KQE9	123 aa		10.88	□□□□□ -0.67
RFX2-222	ENST00000592546	TRAV21	A0A0B4J279	112 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	CRLF1	O75462	422 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546		A4D1N5	150 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	SAA4	P35542	130 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	TMEM170B	Q5T4T1	132 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	POM121L12	Q8N7R1	296 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	ZNRF2	Q8NHG8	242 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	C16orf92	Q96LL3	132 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546	BPESC1	Q9GZL8	116 aa		10.87	□□□□□ -0.67
RFX2-222	ENST00000592546		G3V318	75 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546		J3QQQ9	107 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	RPL32	P62910	135 aa	Known RBP	10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	C20orf173	Q96LM9	149 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	ATP6V0E1	O15342	81 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	MED14OS	P0DP75	135 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	UBE2E1	P51965	193 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	LMO4	P61968	165 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	ANXA2R	Q3ZCQ2	193 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546		Q6Q795	121 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546		Q8N1Y9	231 aa		10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	TMEM263	Q8WUH6	116 aa	Known RBP	10.86	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE12J	A6NER3	117 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	C19orf84	I3L1E1	186 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE7	O76087	117 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE12F	P0CL80	117 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE12G	P0CL81	117 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE12I	P0CL82	117 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546		P0DMU3	169 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	FAM231A	P0DMU4	169 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	FAM231C	P0DMU5	169 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	RPL39	P62891	51 aa	Known RBP	10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	GAGE4	Q13068	117 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	NTN5	Q8WTR8	489 aa	Predicted RBP	10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	TMEM141	Q96I45	108 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	LINC00477	Q96M19	166 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	IGSF10	Q6WRI0	2623 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	CCDC179	H3BU77	68 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	ZNF876P	Q49A33	203 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	C9orf139	Q6ZV77	190 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	TIMM17A	Q99595	171 aa		10.85	□□□□□ -0.67
RFX2-222	ENST00000592546	IGHV4OR15-8	A0A075B7B6	117 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546		A0A087WW49	117 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	RNASE3	P12724	160 aa	Known RBP	10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	POLR2K	P53803	58 aa	Known RBP	10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	LINC00315	P59091	139 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	LINC01600	Q96MT4	127 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546		A0A0B4J2C4	111 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	IFITM1	P13164	125 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	KIF25-AS1	Q9Y6Z4	181 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	CFAP46	Q8IYW2	2715 aa		10.84	□□□□□ -0.67
RFX2-222	ENST00000592546	LGALS3	P17931	250 aa	Known RBP	10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	TTC32	Q5I0X7	151 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	MUC4	Q99102	2169 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	GNRH2	O43555	120 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	ELANE	P08246	267 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	ARL3	P36405	182 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	LINC01620	Q4KN68	170 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	DEFB104A	Q8WTQ1	72 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	ODF3	Q96PU9	254 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	USP24	Q9UPU5	2620 aa		10.83	□□□□□ -0.68
RFX2-222	ENST00000592546	IGHV3OR16-10	A0A075B7F0	116 aa		10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	RPL13A	P40429	203 aa	Known RBP	10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	EEF1AKMT3	Q96AZ1	226 aa		10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	MAP1A	P78559	2803 aa	Predicted RBP	10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	TRBV7-9	A0A0J9YWB2	115 aa		10.82	□□□□□ -0.68
RFX2-222	ENST00000592546		H7C2G1	150 aa		10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	NXPH4	O95158	308 aa		10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	TMEM219	Q86XT9	240 aa		10.82	□□□□□ -0.68
RFX2-222	ENST00000592546	ATXN8	Q156A1	80 aa		10.81	□□□□□ -0.68
RFX2-222	ENST00000592546	OR10J6P	Q8NGY7	276 aa		10.81	□□□□□ -0.68
RFX2-222	ENST00000592546	TRBV7-1	A0A0A6YYK4	115 aa		10.81	□□□□□ -0.68
RFX2-222	ENST00000592546	TEX49	A0A1B0GTD5	131 aa		10.81	□□□□□ -0.68
RFX2-222	ENST00000592546	VCY	O14598	125 aa		10.81	□□□□□ -0.68
RFX2-222	ENST00000592546	LINC00527	Q9UJ94	153 aa		10.81	□□□□□ -0.68
RFX2-222	ENST00000592546	NPFF	O15130	113 aa		10.8	□□□□□ -0.68
RFX2-222	ENST00000592546	DEFB1	P60022	68 aa		10.8	□□□□□ -0.68
RFX2-222	ENST00000592546	MUSTN1	Q8IVN3	82 aa		10.8	□□□□□ -0.68
RFX2-222	ENST00000592546	FAM110A	Q9BQ89	295 aa		10.8	□□□□□ -0.68
RFX2-222	ENST00000592546	TRAV2	A0A0B4J234	112 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms