RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 Q6ZSN1 163 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 SH2D6Q7Z4S9 175 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 OR2D3Q8NGH3 330 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 SMIM12Q96EX1 92 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 SFRP2Q96HF1 295 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 TPPP3Q9BW30 176 aa9.53□□□□□ -0.88
CLIP3-205ENST00000592017 HSPG2P98160 4391 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 GAGE12JA6NER3 117 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 P01737 135 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 GZMBP10144 247 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 GAGE1Q13065 139 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 GAGE4Q13068 117 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 GAGE5Q13069 117 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 UFSP1Q6NVU6 142 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 C14orf178Q8N769 122 aaPredicted RBP9.52□□□□□ -0.89
CLIP3-205ENST00000592017 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.89
CLIP3-205ENST00000592017 EIF5A2Q9GZV4 153 aaKnown RBP9.52□□□□□ -0.89
CLIP3-205ENST00000592017 A0A1W2PPQ1 181 aa9.51□□□□□ -0.89
CLIP3-205ENST00000592017 SNAI2O43623 268 aa9.51□□□□□ -0.89
CLIP3-205ENST00000592017 BIN3Q9NQY0 253 aa9.51□□□□□ -0.89
CLIP3-205ENST00000592017 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
CLIP3-205ENST00000592017 OR5AL1P0C617 328 aa9.5□□□□□ -0.89
CLIP3-205ENST00000592017 RPS20P60866 119 aaKnown RBP9.5□□□□□ -0.89
CLIP3-205ENST00000592017 FER1L6-AS1Q8NA97 138 aa9.5□□□□□ -0.89
CLIP3-205ENST00000592017 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
CLIP3-205ENST00000592017 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
CLIP3-205ENST00000592017 DNAH5Q8TE73 4624 aa9.5□□□□□ -0.89
CLIP3-205ENST00000592017 ABCA13Q86UQ4 5058 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 TMEM250H0YL14 139 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 CRYGDP07320 174 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 LINC00315P59091 139 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 ZNF56Q15929 161 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 OR10J3Q5JRS4 329 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 Q9UF83 564 aa9.49□□□□□ -0.89
CLIP3-205ENST00000592017 APOBP04114 4563 aaKnown RBP9.48□□□□□ -0.89
CLIP3-205ENST00000592017 K7EN84 100 aa9.48□□□□□ -0.89
CLIP3-205ENST00000592017 TIRAPP58753 221 aa9.48□□□□□ -0.89
CLIP3-205ENST00000592017 OCC1Q8TAD7 63 aa9.48□□□□□ -0.89
CLIP3-205ENST00000592017 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
CLIP3-205ENST00000592017 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
CLIP3-205ENST00000592017 RNASE7Q9H1E1 156 aaKnown RBP9.48□□□□□ -0.89
CLIP3-205ENST00000592017 TRAV8-6A0A0B4J262 113 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 IGLC6P0CF74 106 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 EVI2AP22794 236 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 AP1S3Q96PC3 154 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
CLIP3-205ENST00000592017 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
CLIP3-205ENST00000592017 F5H697 171 aa9.46□□□□□ -0.9
CLIP3-205ENST00000592017 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
CLIP3-205ENST00000592017 LELP1Q5T871 98 aa9.46□□□□□ -0.9
CLIP3-205ENST00000592017 TEX261Q6UWH6 196 aa9.46□□□□□ -0.9
CLIP3-205ENST00000592017 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.9
CLIP3-205ENST00000592017 IGHV3-38A0A0C4DH36 116 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 MGPP08493 103 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 DNAH10OSP0CZ25 163 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 RAB4BP61018 213 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 SMIM7Q9BQ49 75 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
CLIP3-205ENST00000592017 TRBV10-1A0A0K0K1A3 114 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 IGHV3-30P01768 117 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
CLIP3-205ENST00000592017 IGHV3-30-3P0DP02 117 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 IGHV3-30-5P0DP03 117 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
CLIP3-205ENST00000592017 CACNG7P62955 275 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 RPL36AP83881 106 aaKnown RBP9.44□□□□□ -0.9
CLIP3-205ENST00000592017 RPL36ALQ969Q0 106 aaKnown RBP9.44□□□□□ -0.9
CLIP3-205ENST00000592017 MSRB1Q9NZV6 116 aa9.44□□□□□ -0.9
CLIP3-205ENST00000592017 ZNF727A8MUV8 499 aa9.43□□□□□ -0.9
CLIP3-205ENST00000592017 F2Z2F3 143 aa9.43□□□□□ -0.9
CLIP3-205ENST00000592017 GATCO43716 136 aaKnown RBP9.43□□□□□ -0.9
CLIP3-205ENST00000592017 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
CLIP3-205ENST00000592017 Q6ZRN7 208 aaPredicted RBP9.43□□□□□ -0.9
CLIP3-205ENST00000592017 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
CLIP3-205ENST00000592017 CTRLP40313 264 aa9.42□□□□□ -0.9
CLIP3-205ENST00000592017 KRTAP10-2P60368 255 aa9.42□□□□□ -0.9
CLIP3-205ENST00000592017 ERVFC1-1P60608 527 aa9.42□□□□□ -0.9
CLIP3-205ENST00000592017 SPATA12Q7Z6I5 190 aa9.42□□□□□ -0.9
CLIP3-205ENST00000592017 TRBV7-3A0A075B6L6 115 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 K7EP13 123 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 UBE2D3P61077 147 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 UBE2D2P62837 147 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 LINC01551Q86U37 167 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 NFE4Q86UQ8 179 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
CLIP3-205ENST00000592017 A0A087WWC5 75 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms