RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 HERC2O95714 4834 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 F5H697 171 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 RTL8CO15255 209 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 EVI2AP22794 236 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 OR10J3Q5JRS4 329 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 Q6ZSN1 163 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 OR10AG1Q8NH19 301 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
BRCA1-227ENST00000591849 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
BRCA1-227ENST00000591849 IGLV2-8P01709 118 aa6.91□□□□□ -1.3
BRCA1-227ENST00000591849 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
BRCA1-227ENST00000591849 ZNF56Q15929 161 aa6.91□□□□□ -1.3
BRCA1-227ENST00000591849 GTSF1LQ9H1H1 148 aa6.91□□□□□ -1.3
BRCA1-227ENST00000591849 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
BRCA1-227ENST00000591849 C19orf71A6NCJ1 209 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 SNAI2O43623 268 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 CRYGDP07320 174 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 GZMBP10144 247 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 TIRAPP58753 221 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 CACNG7P62955 275 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 WFDC10BQ8IUB3 73 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 C14orf178Q8N769 122 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-227ENST00000591849 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-227ENST00000591849 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 OCC1Q8TAD7 63 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
BRCA1-227ENST00000591849 TRBV20OR9-2A0A075B6H5 130 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 F2Z2F3 143 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 GATCO43716 136 aaKnown RBP6.89□□□□□ -1.31
BRCA1-227ENST00000591849 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
BRCA1-227ENST00000591849 RAB4BP61018 213 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
BRCA1-227ENST00000591849 LELP1Q5T871 98 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 ZNF575Q86XF7 245 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
BRCA1-227ENST00000591849 FAM210AQ96ND0 272 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 SMIM7Q9BQ49 75 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-227ENST00000591849 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
BRCA1-227ENST00000591849 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
BRCA1-227ENST00000591849 IGHV3-38A0A0C4DH36 116 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 ZNF727A8MUV8 499 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 MGPP08493 103 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 PEA15Q15121 130 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 TEX261Q6UWH6 196 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 NFE4Q86UQ8 179 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 C10orf126Q8N4M7 172 aa6.88□□□□□ -1.31
BRCA1-227ENST00000591849 RNASE7Q9H1E1 156 aaKnown RBP6.88□□□□□ -1.31
BRCA1-227ENST00000591849 KIAA1109Q2LD37 5005 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 A0A087WWC5 75 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 TRBV10-1A0A0K0K1A3 114 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 K7EP13 123 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 IGHV3-30P01768 117 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 IGHV3-33P01772 117 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 TRGC1P0CF51 173 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 IGHV3-30-3P0DP02 117 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 IGHV3-30-5P0DP03 117 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 LINC00315P59091 139 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 TNP2Q05952 138 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 KCNIP4Q6PIL6 250 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 SMIM15Q7Z3B0 74 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 MSRB1Q9NZV6 116 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 DNAH10Q8IVF4 4471 aa6.87□□□□□ -1.31
BRCA1-227ENST00000591849 TRBV7-3A0A075B6L6 115 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 A8MWL6 223 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 K7EN84 100 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 EREGO14944 169 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 SRP19P09132 144 aaKnown RBP6.86□□□□□ -1.31
BRCA1-227ENST00000591849 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 RAB14P61106 215 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 TWIST1Q15672 202 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 BORCS7Q96B45 105 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 URGCP-MRPS24S4R325 110 aa6.86□□□□□ -1.31
BRCA1-227ENST00000591849 H7C1H1 209 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 NDUFS6O75380 124 aaKnown RBP6.85□□□□□ -1.31
BRCA1-227ENST00000591849 NTF3P20783 257 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 WDR73Q6P4I2 378 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 Q9UF83 564 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
BRCA1-227ENST00000591849 PSCAO43653 123 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 FAM74A3Q4VXF1 159 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 FAM231DQ6ZW35 169 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 NEXN-AS1Q8NBZ9 246 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 PGLYRP4Q96LB8 373 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
BRCA1-227ENST00000591849 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
BRCA1-227ENST00000591849 LINC00694P0DN24 101 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms