RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 BEX4Q9NWD9 120 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 TACC2O95359 2948 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 KALRNO60229 2985 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 A0A0J9YY99 117 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 DEFB121Q5J5C9 76 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 KLHL30-AS1Q8NEE0 82 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 DPH3P1Q9H4G8 78 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 CUL9Q8IWT3 2517 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 E7EQL1 145 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 H3BT86 120 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 NSUN5P1Q3KNT7 163 aa9.35□□□□□ -0.91
SMARCA4-217ENST00000591595 ACYP1P07311 99 aa9.34□□□□□ -0.91
SMARCA4-217ENST00000591595 COX6B1P14854 86 aa9.34□□□□□ -0.91
SMARCA4-217ENST00000591595 H7C423 109 aa9.34□□□□□ -0.91
SMARCA4-217ENST00000591595 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
SMARCA4-217ENST00000591595 KAAG1Q9UBP8 84 aa9.34□□□□□ -0.91
SMARCA4-217ENST00000591595 SPTBN1Q01082 2364 aaKnown RBP9.34□□□□□ -0.92
SMARCA4-217ENST00000591595 I3L2K1 104 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 IGLV1-47P01700 117 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 CRIP1P50238 77 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 IL17RELQ6ZVW7 336 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 CXCL5P42830 114 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 ANKHD1Q8IWZ3 2542 aaKnown RBP9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 TLN1Q9Y490 2541 aaKnown RBP9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
SMARCA4-217ENST00000591595 KLRB1Q12918 225 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 Q6ZS46 218 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 IGHV3-23P01764 117 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 RNF185Q96GF1 192 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 ATMQ13315 3056 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 IGHV3OR16-8A0A075B7F1 116 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 K7EIM0 57 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 GATA1P15976 413 aaPredicted RBP9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 LAGE3Q14657 143 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 ZNF491Q8N8L2 437 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 EEF1AKMT3Q96AZ1 226 aa9.32□□□□□ -0.92
SMARCA4-217ENST00000591595 IGHV3-35A0A0C4DH35 117 aa9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 PRR25Q96S07 402 aa9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 H3BRN7 92 aa9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 NBR2O15453 112 aa9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 HIST1H4AP62805 103 aaKnown RBP9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 WFDC11Q8NEX6 87 aa9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
SMARCA4-217ENST00000591595 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 NBL1P41271 181 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 NEXN-AS1Q8NBZ9 246 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 LINC01560Q8TB33 94 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 TRBV6-1A0A0K0K1D8 114 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 LY6HO94772 140 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 IGFL4Q6B9Z1 124 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 IL17DQ8TAD2 202 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 Q8TAT8 98 aa9.3□□□□□ -0.92
SMARCA4-217ENST00000591595 ZZEF1O43149 2961 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 AKAP13Q12802 2813 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 CEP295Q9C0D2 2601 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 SH2D1AO60880 128 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 LYPD1Q8N2G4 141 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 SERP2Q8N6R1 65 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 TMEM190Q8WZ59 177 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 TRIAP1O43715 76 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 PRIMA1Q86XR5 153 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 PEMTQ9UBM1 199 aa9.29□□□□□ -0.92
SMARCA4-217ENST00000591595 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
SMARCA4-217ENST00000591595 MSRB1Q9NZV6 116 aa9.28□□□□□ -0.92
SMARCA4-217ENST00000591595 DPM3Q9P2X0 92 aa9.28□□□□□ -0.92
SMARCA4-217ENST00000591595 SPRY2O43597 315 aa9.27□□□□□ -0.92
SMARCA4-217ENST00000591595 NPC2P61916 151 aa9.27□□□□□ -0.92
SMARCA4-217ENST00000591595 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.92
SMARCA4-217ENST00000591595 CDSNQ15517 529 aa9.27□□□□□ -0.92
SMARCA4-217ENST00000591595 LINC01561Q8N1V8 128 aa9.27□□□□□ -0.92
SMARCA4-217ENST00000591595 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
SMARCA4-217ENST00000591595 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
SMARCA4-217ENST00000591595 AVPP01185 164 aa9.27□□□□□ -0.93
SMARCA4-217ENST00000591595 KLK15Q9H2R5 256 aa9.27□□□□□ -0.93
SMARCA4-217ENST00000591595 AKAP6Q13023 2319 aa9.27□□□□□ -0.93
SMARCA4-217ENST00000591595 TRBV7-1A0A0A6YYK4 115 aa9.26□□□□□ -0.93
SMARCA4-217ENST00000591595 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
SMARCA4-217ENST00000591595 RHOHQ15669 191 aa9.26□□□□□ -0.93
SMARCA4-217ENST00000591595 C16orf92Q96LL3 132 aa9.26□□□□□ -0.93
SMARCA4-217ENST00000591595 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
SMARCA4-217ENST00000591595 RNF5Q99942 180 aa9.26□□□□□ -0.93
SMARCA4-217ENST00000591595 BRK1Q8WUW1 75 aa9.25□□□□□ -0.93
SMARCA4-217ENST00000591595 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
SMARCA4-217ENST00000591595 PDE6HQ13956 83 aa9.25□□□□□ -0.93
SMARCA4-217ENST00000591595 SYNJ2BPP57105 145 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms