RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 KLLNB2CW77 178 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 H3BUT2 72 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 DPF1Q92782 380 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 A0A0J9YX75 114 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 K7EP34 96 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 IGKV3-20P01619 116 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 SLC25A34Q6PIV7 304 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 TMEM70Q9BUB7 260 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 S100A4P26447 101 aaKnown RBP8.44□□□□□ -1.06
TPM4-213ENST00000591226 ASIPP42127 132 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 CACNG7P62955 275 aa8.44□□□□□ -1.06
TPM4-213ENST00000591226 AGRNO00468 2067 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 GNRH2O43555 120 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 SMIM17P0DL12 118 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 GATA1P15976 413 aaPredicted RBP8.43□□□□□ -1.06
TPM4-213ENST00000591226 CD300EQ496F6 205 aaPredicted RBP8.43□□□□□ -1.06
TPM4-213ENST00000591226 C11orf44Q8N8P7 122 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 A0A087WWL8 130 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 TSPAN13O95857 204 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 OR9G4Q8NGQ1 327 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 OR2K2Q8NGT1 345 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 DLX4Q92988 240 aaPredicted RBP8.43□□□□□ -1.06
TPM4-213ENST00000591226 ST20Q9HBF5 79 aa8.43□□□□□ -1.06
TPM4-213ENST00000591226 NOTCH2Q04721 2471 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 A0A096LNJ9 63 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 M0R381 172 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 TRAV26-2A0A0B4J265 109 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 OR4C46A6NHA9 309 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 LEPP41159 167 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 PEMTQ9UBM1 199 aa8.42□□□□□ -1.06
TPM4-213ENST00000591226 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
TPM4-213ENST00000591226 FXYD7P58549 80 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 ODF3Q96PU9 254 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 SCRT2Q9NQ03 307 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 HSPB8Q9UJY1 196 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 PHLDA3Q9Y5J5 127 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 TRAV12-2A0A075B6T6 113 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 A0A1W2PRX2 142 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 CRXO43186 299 aaPredicted RBP8.41□□□□□ -1.06
TPM4-213ENST00000591226 SMR3AQ99954 134 aa8.41□□□□□ -1.06
TPM4-213ENST00000591226 C9orf118A6NHY6 69 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 H0Y8G0 127 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 CD28P10747 220 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 FAM159AQ6UWV7 190 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 TMEM61Q8N0U2 210 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 RAB37Q96AX2 223 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
TPM4-213ENST00000591226 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.07
TPM4-213ENST00000591226 SPINK13Q1W4C9 94 aa8.4□□□□□ -1.07
TPM4-213ENST00000591226 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.07
TPM4-213ENST00000591226 MCRIP2Q9BUT9 160 aaKnown RBP8.4□□□□□ -1.07
TPM4-213ENST00000591226 ZNF747Q9BV97 191 aa8.4□□□□□ -1.07
TPM4-213ENST00000591226 A8MZ25 164 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.39□□□□□ -1.07
TPM4-213ENST00000591226 BOD1L2Q8IYS8 172 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 MUC4Q99102 2169 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 DUSP14O95147 198 aaKnown RBP8.39□□□□□ -1.07
TPM4-213ENST00000591226 NRACQ8N912 160 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 DYNLRB2Q8TF09 96 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 HIVEP2P31629 2446 aa8.39□□□□□ -1.07
TPM4-213ENST00000591226 SIVA1O15304 175 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 HBDP02042 147 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 CD7P09564 240 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 DEFB131AP59861 70 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 RNF183Q96D59 192 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 C14orf178Q8N769 122 aaPredicted RBP8.38□□□□□ -1.07
TPM4-213ENST00000591226 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
TPM4-213ENST00000591226 PMCHL2Q9BQD1 86 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 SPATA25Q9BR10 227 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
TPM4-213ENST00000591226 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 OR11H12B2RN74 326 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 NXPH4O95158 308 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 FHL3Q13643 280 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 DEFB114Q30KQ6 69 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 SMIM20Q8N5G0 67 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 OR11H2Q8NH07 326 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 DPH3P1Q9H4G8 78 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
TPM4-213ENST00000591226 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 TRAV2A0A0B4J234 112 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 MGPP08493 103 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 SEC11AP67812 179 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 TMEM97Q5BJF2 176 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 Q8N8P6 123 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 OR5A1Q8NGJ0 315 aa8.36□□□□□ -1.07
TPM4-213ENST00000591226 ZNF418Q8TF45 676 aaPredicted RBP8.36□□□□□ -1.07
TPM4-213ENST00000591226 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms