RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 RASL10AQ92737 203 aa12.54□□□□□ -0.4
CXXC1-212ENST00000589940 RNF183Q96D59 192 aa12.54□□□□□ -0.4
CXXC1-212ENST00000589940 NDUFAF3Q9BU61 184 aa12.54□□□□□ -0.4
CXXC1-212ENST00000589940 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
CXXC1-212ENST00000589940 D6R8Y8 96 aa12.54□□□□□ -0.4
CXXC1-212ENST00000589940 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
CXXC1-212ENST00000589940 U3KQK5 164 aa12.54□□□□□ -0.4
CXXC1-212ENST00000589940 A0A087WWL8 130 aa12.53□□□□□ -0.4
CXXC1-212ENST00000589940 PRB2P02812 416 aaPredicted RBP12.53□□□□□ -0.4
CXXC1-212ENST00000589940 CKS2P33552 79 aa12.53□□□□□ -0.4
CXXC1-212ENST00000589940 OR11H2Q8NH07 326 aa12.53□□□□□ -0.4
CXXC1-212ENST00000589940 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
CXXC1-212ENST00000589940 PPBPP02775 128 aa12.53□□□□□ -0.4
CXXC1-212ENST00000589940 LINC00315P59091 139 aa12.53□□□□□ -0.4
CXXC1-212ENST00000589940 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
CXXC1-212ENST00000589940 TRGV1A0A0A0MS02 117 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 A8MWV9 139 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 CRYGDP07320 174 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 NDUFA6P56556 154 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 MGPP08493 103 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 Q0VG73 95 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 OR10J3Q5JRS4 329 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 POM121L12Q8N7R1 296 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 MRAP2Q96G30 205 aa12.52□□□□□ -0.41
CXXC1-212ENST00000589940 SMKR1H3BMG3 65 aa12.51□□□□□ -0.41
CXXC1-212ENST00000589940 K7EIL1 84 aa12.51□□□□□ -0.41
CXXC1-212ENST00000589940 NCR2O95944 276 aa12.51□□□□□ -0.41
CXXC1-212ENST00000589940 C18orf32Q8TCD1 76 aa12.51□□□□□ -0.41
CXXC1-212ENST00000589940 PRELID3AQ96N28 172 aa12.51□□□□□ -0.41
CXXC1-212ENST00000589940 Q6ZTI0 123 aa12.5□□□□□ -0.41
CXXC1-212ENST00000589940 TRAV26-2A0A0B4J265 109 aa12.5□□□□□ -0.41
CXXC1-212ENST00000589940 LINC00587B1AMM8 73 aa12.5□□□□□ -0.41
CXXC1-212ENST00000589940 EMP1P54849 157 aa12.5□□□□□ -0.41
CXXC1-212ENST00000589940 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
CXXC1-212ENST00000589940 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
CXXC1-212ENST00000589940 TP53TG1Q9Y2A0 90 aa12.5□□□□□ -0.41
CXXC1-212ENST00000589940 MIFP14174 115 aa12.49□□□□□ -0.41
CXXC1-212ENST00000589940 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
CXXC1-212ENST00000589940 SNRPEP62304 92 aaKnown RBP12.49□□□□□ -0.41
CXXC1-212ENST00000589940 LAMTOR2Q9Y2Q5 125 aa12.49□□□□□ -0.41
CXXC1-212ENST00000589940 C5orf52A6NGY3 159 aa12.48□□□□□ -0.41
CXXC1-212ENST00000589940 RS1O15537 224 aa12.48□□□□□ -0.41
CXXC1-212ENST00000589940 IQCJQ1A5X6 159 aa12.48□□□□□ -0.41
CXXC1-212ENST00000589940 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
CXXC1-212ENST00000589940 BAGE3Q86Y29 109 aa12.48□□□□□ -0.41
CXXC1-212ENST00000589940 IGHV4-28A0A0C4DH34 117 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 F5H697 171 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
CXXC1-212ENST00000589940 ZNF56Q15929 161 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 Q8NAQ8 132 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 RHODO00212 210 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 NPYP01303 97 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 SUMO4Q6EEV6 95 aa12.47□□□□□ -0.41
CXXC1-212ENST00000589940 TNFRSF6BO95407 300 aa12.46□□□□□ -0.41
CXXC1-212ENST00000589940 NRACQ8N912 160 aa12.46□□□□□ -0.41
CXXC1-212ENST00000589940 GAGE12BA1L429 117 aa12.46□□□□□ -0.42
CXXC1-212ENST00000589940 GAGE7O76087 117 aa12.46□□□□□ -0.42
CXXC1-212ENST00000589940 GAGE12FP0CL80 117 aa12.46□□□□□ -0.42
CXXC1-212ENST00000589940 GAGE12GP0CL81 117 aa12.46□□□□□ -0.42
CXXC1-212ENST00000589940 GAGE12IP0CL82 117 aa12.46□□□□□ -0.42
CXXC1-212ENST00000589940 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.42
CXXC1-212ENST00000589940 IGHV3-73A0A0B4J1V6 119 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 DEFB121Q5J5C9 76 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 HOXA5P20719 270 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 RETNQ9HD89 108 aa12.45□□□□□ -0.42
CXXC1-212ENST00000589940 LYRM9A8MSI8 78 aa12.44□□□□□ -0.42
CXXC1-212ENST00000589940 SERF1AO75920 110 aa12.44□□□□□ -0.42
CXXC1-212ENST00000589940 LINC00310P59036 64 aa12.44□□□□□ -0.42
CXXC1-212ENST00000589940 LINC00612Q8N6U2 182 aa12.44□□□□□ -0.42
CXXC1-212ENST00000589940 DEFB4AO15263 64 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 PPP1R17O96001 155 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 SMIM6P0DI80 62 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 SBSPONQ8IVN8 264 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 NACAE9PAV3 2078 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 M0QY20 66 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 RPL39LQ96EH5 51 aaKnown RBP12.43□□□□□ -0.42
CXXC1-212ENST00000589940 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 MAP1LC3AQ9H492 121 aa12.43□□□□□ -0.42
CXXC1-212ENST00000589940 FAM222AQ5U5X8 452 aa12.42□□□□□ -0.42
CXXC1-212ENST00000589940 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
CXXC1-212ENST00000589940 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
CXXC1-212ENST00000589940 NIT1Q86X76 327 aa12.42□□□□□ -0.42
CXXC1-212ENST00000589940 C18orf15Q96N68 181 aa12.42□□□□□ -0.42
CXXC1-212ENST00000589940 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
CXXC1-212ENST00000589940 H7C1H1 209 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 NUPR1O60356 82 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 ESDP10768 282 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 HIST3H2BBQ8N257 126 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 PRSS3P2Q8NHM4 247 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 URB1-AS1Q96HZ7 61 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 CIDEAO60543 219 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms